Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Speer3W4VSP1 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Speer3W4VSP1 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Gm9164-201ENSMUST00000118700 1014 ntBASIC12.38□□□□□ -0.43
Speer3W4VSP1 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Gm16177-201ENSMUST00000120728 718 ntBASIC12.38□□□□□ -0.43
Speer3W4VSP1 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Speer3W4VSP1 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Gm22121-201ENSMUST00000175148 54 ntBASIC12.38□□□□□ -0.43
Speer3W4VSP1 A630023A22Rik-201ENSMUST00000178958 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Gm26927-201ENSMUST00000182385 965 ntBASIC12.38□□□□□ -0.43
Speer3W4VSP1 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Gm28766-201ENSMUST00000191086 234 ntBASIC12.38□□□□□ -0.43
Speer3W4VSP1 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Gm42783-201ENSMUST00000197075 795 ntBASIC12.38□□□□□ -0.43
Speer3W4VSP1 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Gm5904-201ENSMUST00000210286 865 ntBASIC12.38□□□□□ -0.43
Speer3W4VSP1 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC12.38□□□□□ -0.43
Speer3W4VSP1 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.38□□□□□ -0.43
Speer3W4VSP1 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Speer3W4VSP1 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.38□□□□□ -0.43
Speer3W4VSP1 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.38□□□□□ -0.43
Speer3W4VSP1 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.38□□□□□ -0.43
Speer3W4VSP1 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Speer3W4VSP1 Gm38368-201ENSMUST00000193181 1335 ntBASIC12.37□□□□□ -0.43
Speer3W4VSP1 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC12.37□□□□□ -0.43
Speer3W4VSP1 Milr1-201ENSMUST00000086353 1348 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Speer3W4VSP1 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.37□□□□□ -0.43
Speer3W4VSP1 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.37□□□□□ -0.43
Speer3W4VSP1 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Speer3W4VSP1 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Speer3W4VSP1 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Speer3W4VSP1 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Speer3W4VSP1 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Speer3W4VSP1 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Speer3W4VSP1 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Speer3W4VSP1 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Speer3W4VSP1 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Speer3W4VSP1 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Speer3W4VSP1 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Speer3W4VSP1 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Speer3W4VSP1 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC12.37□□□□□ -0.43
Speer3W4VSP1 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Speer3W4VSP1 Gm16285-201ENSMUST00000162999 347 ntBASIC12.37□□□□□ -0.43
Speer3W4VSP1 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Speer3W4VSP1 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.37□□□□□ -0.43
Speer3W4VSP1 Gm45784-201ENSMUST00000188360 142 ntBASIC12.37□□□□□ -0.43
Speer3W4VSP1 Gm43531-201ENSMUST00000200676 1114 ntBASIC12.37□□□□□ -0.43
Speer3W4VSP1 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Speer3W4VSP1 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Speer3W4VSP1 Gm17611-202ENSMUST00000220613 814 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms