Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Cldn9Q9Z0S7 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cldn9Q9Z0S7 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn9Q9Z0S7 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.42□□□□□ -0.58
Cldn9Q9Z0S7 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn9Q9Z0S7 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn9Q9Z0S7 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn9Q9Z0S7 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.42□□□□□ -0.58
Cldn9Q9Z0S7 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.42□□□□□ -0.58
Cldn9Q9Z0S7 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn9Q9Z0S7 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Cldn9Q9Z0S7 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn9Q9Z0S7 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn9Q9Z0S7 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn9Q9Z0S7 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cldn9Q9Z0S7 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn9Q9Z0S7 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn9Q9Z0S7 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn9Q9Z0S7 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Cldn9Q9Z0S7 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn9Q9Z0S7 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn9Q9Z0S7 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Cldn9Q9Z0S7 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cldn9Q9Z0S7 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Cldn9Q9Z0S7 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.42□□□□□ -0.58
Cldn9Q9Z0S7 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Cldn9Q9Z0S7 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.42□□□□□ -0.58
Cldn9Q9Z0S7 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Gm15198-201ENSMUST00000117283 177 ntBASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Gm11700-201ENSMUST00000119409 403 ntBASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Gm9192-201ENSMUST00000183221 985 ntBASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 AA914427-201ENSMUST00000193194 1166 ntBASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Gm38317-201ENSMUST00000195564 343 ntBASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Paupar-201ENSMUST00000194826 3482 ntBASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Cldn9Q9Z0S7 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Gm11660-201ENSMUST00000120955 412 ntBASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Gm43179-201ENSMUST00000198797 275 ntBASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Cldn9Q9Z0S7 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms