Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp4cQ9D7F7 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.2□□□□□ -0.14
Chmp4cQ9D7F7 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp4cQ9D7F7 Gm2991-201ENSMUST00000173338 480 ntBASIC14.2□□□□□ -0.14
Chmp4cQ9D7F7 Gm6621-201ENSMUST00000193251 772 ntBASIC14.2□□□□□ -0.14
Chmp4cQ9D7F7 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.2□□□□□ -0.14
Chmp4cQ9D7F7 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC14.2□□□□□ -0.14
Chmp4cQ9D7F7 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14.2□□□□□ -0.14
Chmp4cQ9D7F7 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp4cQ9D7F7 Gm7537-201ENSMUST00000221660 1414 ntBASIC14.2□□□□□ -0.14
Chmp4cQ9D7F7 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp4cQ9D7F7 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Chmp4cQ9D7F7 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp4cQ9D7F7 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp4cQ9D7F7 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.2□□□□□ -0.14
Chmp4cQ9D7F7 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.2□□□□□ -0.14
Chmp4cQ9D7F7 Gm9796-201ENSMUST00000062249 2250 ntBASIC14.2□□□□□ -0.14
Chmp4cQ9D7F7 Gm38194-201ENSMUST00000194529 2211 ntBASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Gm23270-201ENSMUST00000104055 131 ntBASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Gm12164-201ENSMUST00000121695 551 ntBASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Gm6013-201ENSMUST00000212264 699 ntBASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Gm10478-201ENSMUST00000084451 396 ntBASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 AC138329.2-201ENSMUST00000225579 1842 ntBASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Gm10548-201ENSMUST00000097631 2629 ntBASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Gm37348-201ENSMUST00000193104 1789 ntBASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp4cQ9D7F7 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 Gm23912-201ENSMUST00000104687 87 ntBASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 Mir8109-201ENSMUST00000184375 117 ntBASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 Gm17931-201ENSMUST00000208132 634 ntBASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 AC126257.1-201ENSMUST00000213195 1536 ntBASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 Gm8155-201ENSMUST00000216363 1612 ntBASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp4cQ9D7F7 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp4cQ9D7F7 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms