Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Vps33aQ9D2N9 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps33aQ9D2N9 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps33aQ9D2N9 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps33aQ9D2N9 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Vps33aQ9D2N9 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Gm38271-201ENSMUST00000192296 1603 ntBASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Gm12341-201ENSMUST00000119724 503 ntBASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Gm13315-201ENSMUST00000120376 991 ntBASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Gm11637-201ENSMUST00000120601 592 ntBASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Gm14441-201ENSMUST00000121960 540 ntBASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Gm6152-201ENSMUST00000151704 340 ntBASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Gm6714-201ENSMUST00000218677 2330 ntBASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Vps33aQ9D2N9 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Gm11700-201ENSMUST00000119409 403 ntBASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Gm38314-201ENSMUST00000195709 625 ntBASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Gm6218-201ENSMUST00000219812 628 ntBASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Vps33aQ9D2N9 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps33aQ9D2N9 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Vps33aQ9D2N9 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vps33aQ9D2N9 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps33aQ9D2N9 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps33aQ9D2N9 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Vps33aQ9D2N9 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC12.54□□□□□ -0.4
Vps33aQ9D2N9 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Vps33aQ9D2N9 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Vps33aQ9D2N9 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.54□□□□□ -0.4
Vps33aQ9D2N9 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps33aQ9D2N9 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.54□□□□□ -0.4
Vps33aQ9D2N9 Gm5706-201ENSMUST00000181525 993 ntBASIC12.54□□□□□ -0.4
Vps33aQ9D2N9 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Vps33aQ9D2N9 Gm27437-201ENSMUST00000183429 107 ntBASIC12.54□□□□□ -0.4
Vps33aQ9D2N9 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Vps33aQ9D2N9 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms