Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim42Q9D2H5 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim42Q9D2H5 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim42Q9D2H5 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Trim42Q9D2H5 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Trim42Q9D2H5 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim42Q9D2H5 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim42Q9D2H5 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim42Q9D2H5 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim42Q9D2H5 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim42Q9D2H5 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim42Q9D2H5 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Gm45089-201ENSMUST00000208082 2040 ntBASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Gm11597-201ENSMUST00000121423 964 ntBASIC11.94□□□□□ -0.5
Trim42Q9D2H5 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Gm7287-201ENSMUST00000205267 602 ntBASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Gm5035-201ENSMUST00000215581 927 ntBASIC11.94□□□□□ -0.5
Trim42Q9D2H5 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim42Q9D2H5 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Gm24830-201ENSMUST00000102024 166 ntBASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Gm13369-201ENSMUST00000119442 987 ntBASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Gm8018-201ENSMUST00000173536 789 ntBASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Gm27701-201ENSMUST00000184498 110 ntBASIC11.93□□□□□ -0.5
Trim42Q9D2H5 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.93□□□□□ -0.5
Trim42Q9D2H5 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Gm10146-201ENSMUST00000072739 309 ntBASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Gm26232-201ENSMUST00000083360 166 ntBASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim42Q9D2H5 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms