Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.97□□□□□ -0.33
Ssr1Q9CY50 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ssr1Q9CY50 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssr1Q9CY50 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssr1Q9CY50 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssr1Q9CY50 AC129336.2-201ENSMUST00000218053 3086 ntBASIC12.97□□□□□ -0.33
Ssr1Q9CY50 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Ssr1Q9CY50 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssr1Q9CY50 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssr1Q9CY50 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ssr1Q9CY50 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssr1Q9CY50 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssr1Q9CY50 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssr1Q9CY50 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.97□□□□□ -0.33
Ssr1Q9CY50 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssr1Q9CY50 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssr1Q9CY50 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ssr1Q9CY50 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.97□□□□□ -0.33
Ssr1Q9CY50 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.97□□□□□ -0.33
Ssr1Q9CY50 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssr1Q9CY50 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ssr1Q9CY50 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Ssr1Q9CY50 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssr1Q9CY50 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssr1Q9CY50 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Ssr1Q9CY50 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssr1Q9CY50 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssr1Q9CY50 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssr1Q9CY50 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.96□□□□□ -0.33
Ssr1Q9CY50 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssr1Q9CY50 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Ssr1Q9CY50 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssr1Q9CY50 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssr1Q9CY50 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Ssr1Q9CY50 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.96□□□□□ -0.33
Ssr1Q9CY50 Gm13875-201ENSMUST00000120162 282 ntBASIC12.96□□□□□ -0.33
Ssr1Q9CY50 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ssr1Q9CY50 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.96□□□□□ -0.33
Ssr1Q9CY50 Mir1982-201ENSMUST00000157368 74 ntBASIC12.96□□□□□ -0.33
Ssr1Q9CY50 Gm24548-201ENSMUST00000158650 108 ntBASIC12.96□□□□□ -0.33
Ssr1Q9CY50 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Ssr1Q9CY50 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ssr1Q9CY50 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssr1Q9CY50 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Ssr1Q9CY50 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssr1Q9CY50 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Ssr1Q9CY50 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssr1Q9CY50 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ssr1Q9CY50 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Ssr1Q9CY50 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Ssr1Q9CY50 Gm5403-201ENSMUST00000117105 2795 ntBASIC12.96□□□□□ -0.34
Ssr1Q9CY50 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ssr1Q9CY50 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.96□□□□□ -0.34
Ssr1Q9CY50 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ssr1Q9CY50 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ssr1Q9CY50 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ssr1Q9CY50 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Gm8320-201ENSMUST00000177584 1762 ntBASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Gm8303-201ENSMUST00000178371 1762 ntBASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Gm8331-201ENSMUST00000178433 1762 ntBASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Foxm1-202ENSMUST00000112148 2229 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.95□□□□□ -0.34
Ssr1Q9CY50 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ssr1Q9CY50 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms