Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trim11Q99PQ2 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trim11Q99PQ2 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.55□□□□□ -0.24
Trim11Q99PQ2 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Gm11511-201ENSMUST00000118146 540 ntBASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Mir8109-201ENSMUST00000184375 117 ntBASIC13.54□□□□□ -0.24
Trim11Q99PQ2 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Gm8956-201ENSMUST00000203939 825 ntBASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Gm5186-201ENSMUST00000218781 920 ntBASIC13.54□□□□□ -0.24
Trim11Q99PQ2 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Gm8146-201ENSMUST00000192106 1847 ntBASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim11Q99PQ2 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Trim11Q99PQ2 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim11Q99PQ2 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim11Q99PQ2 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim11Q99PQ2 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim11Q99PQ2 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim11Q99PQ2 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim11Q99PQ2 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim11Q99PQ2 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim11Q99PQ2 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim11Q99PQ2 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim11Q99PQ2 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.53□□□□□ -0.24
Trim11Q99PQ2 Gm32999-201ENSMUST00000192693 562 ntBASIC13.53□□□□□ -0.24
Trim11Q99PQ2 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.53□□□□□ -0.24
Trim11Q99PQ2 Gm4607-201ENSMUST00000206649 577 ntBASIC13.53□□□□□ -0.24
Trim11Q99PQ2 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim11Q99PQ2 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim11Q99PQ2 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim11Q99PQ2 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim11Q99PQ2 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.53□□□□□ -0.24
Trim11Q99PQ2 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim11Q99PQ2 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim11Q99PQ2 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim11Q99PQ2 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim11Q99PQ2 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC13.53□□□□□ -0.24
Trim11Q99PQ2 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim11Q99PQ2 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trim11Q99PQ2 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim11Q99PQ2 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim11Q99PQ2 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim11Q99PQ2 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trim11Q99PQ2 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim11Q99PQ2 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Trim11Q99PQ2 AC126257.2-201ENSMUST00000215507 2300 ntBASIC13.52□□□□□ -0.24
Trim11Q99PQ2 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.52□□□□□ -0.24
Trim11Q99PQ2 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
Trim11Q99PQ2 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.52□□□□□ -0.24
Trim11Q99PQ2 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim11Q99PQ2 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trim11Q99PQ2 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim11Q99PQ2 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trim11Q99PQ2 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim11Q99PQ2 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.52□□□□□ -0.25
Trim11Q99PQ2 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC13.52□□□□□ -0.25
Trim11Q99PQ2 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trim11Q99PQ2 Gm19287-201ENSMUST00000203190 358 ntBASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms