Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Gm23085-201ENSMUST00000157849 293 ntBASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Gm4482-201ENSMUST00000200876 742 ntBASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Gm19287-201ENSMUST00000203190 358 ntBASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Nsd1-205ENSMUST00000224693 852 ntBASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Gtf2ird2Q99NI3 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Gm12857-201ENSMUST00000117678 592 ntBASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Gm15515-201ENSMUST00000117827 822 ntBASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Gm15004-201ENSMUST00000119192 630 ntBASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Gm11941-201ENSMUST00000119904 610 ntBASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Mir3102-201ENSMUST00000175555 104 ntBASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Gm2965-201ENSMUST00000198365 343 ntBASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Gm43378-201ENSMUST00000199336 582 ntBASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Gtf2ird2Q99NI3 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Gm14058-201ENSMUST00000116082 735 ntBASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Gm8566-201ENSMUST00000120174 465 ntBASIC12.22□□□□□ -0.45
Gtf2ird2Q99NI3 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms