Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AL354877.1-201ENST00000424412 413 ntBASIC17.55■□□□□ 0.4
TRIM47Q96LD4 HIST2H2BB-201ENST00000449108 381 ntBASIC17.55■□□□□ 0.4
TRIM47Q96LD4 AC012618.1-201ENST00000461223 412 ntBASIC17.55■□□□□ 0.4
TRIM47Q96LD4 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM47Q96LD4 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.55■□□□□ 0.4
TRIM47Q96LD4 AP003171.2-201ENST00000528208 925 ntBASIC17.55■□□□□ 0.4
TRIM47Q96LD4 MIR4750-201ENST00000584564 56 ntBASIC17.55■□□□□ 0.4
TRIM47Q96LD4 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.55■□□□□ 0.4
TRIM47Q96LD4 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.55■□□□□ 0.4
TRIM47Q96LD4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.55■□□□□ 0.4
TRIM47Q96LD4 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM47Q96LD4 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM47Q96LD4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM47Q96LD4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRIM47Q96LD4 TNRC18P2-201ENST00000417666 2714 ntBASIC17.55■□□□□ 0.4
TRIM47Q96LD4 AC006058.4-201ENST00000624016 1670 ntBASIC17.55■□□□□ 0.4
TRIM47Q96LD4 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRIM47Q96LD4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 AC127383.1-201ENST00000444697 1800 ntBASIC17.54■□□□□ 0.4
TRIM47Q96LD4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 DPM3-202ENST00000368399 517 ntBASIC17.54■□□□□ 0.4
TRIM47Q96LD4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 AL596276.2-201ENST00000447525 331 ntBASIC17.54■□□□□ 0.4
TRIM47Q96LD4 AC104784.1-201ENST00000473096 294 ntBASIC17.54■□□□□ 0.4
TRIM47Q96LD4 AC100850.1-201ENST00000506768 649 ntBASIC17.54■□□□□ 0.4
TRIM47Q96LD4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 ZACNP1-201ENST00000612259 710 ntBASIC17.54■□□□□ 0.4
TRIM47Q96LD4 AC100757.4-201ENST00000626934 759 ntBASIC17.54■□□□□ 0.4
TRIM47Q96LD4 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 C18orf15-201ENST00000623680 2534 ntBASIC17.54■□□□□ 0.4
TRIM47Q96LD4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM47Q96LD4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.53■□□□□ 0.4
TRIM47Q96LD4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 AC068418.2-201ENST00000577309 3703 ntBASIC17.53■□□□□ 0.4
TRIM47Q96LD4 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 AL139094.1-201ENST00000405549 1188 ntBASIC17.53■□□□□ 0.4
TRIM47Q96LD4 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 AC011742.3-201ENST00000439053 820 ntBASIC17.53■□□□□ 0.4
TRIM47Q96LD4 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 AC026740.1-201ENST00000607068 791 ntBASIC17.53■□□□□ 0.4
TRIM47Q96LD4 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRIM47Q96LD4 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms