Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb18Q91Y02 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb18Q91Y02 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb18Q91Y02 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb18Q91Y02 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.46□□□□□ -0.41
Pcdhb18Q91Y02 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb18Q91Y02 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb18Q91Y02 Gm14247-201ENSMUST00000120950 237 ntBASIC12.46□□□□□ -0.41
Pcdhb18Q91Y02 Gm13263-201ENSMUST00000121271 838 ntBASIC12.46□□□□□ -0.41
Pcdhb18Q91Y02 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.46□□□□□ -0.41
Pcdhb18Q91Y02 Gm7666-201ENSMUST00000146631 819 ntBASIC12.46□□□□□ -0.41
Pcdhb18Q91Y02 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.46□□□□□ -0.41
Pcdhb18Q91Y02 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.46□□□□□ -0.41
Pcdhb18Q91Y02 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb18Q91Y02 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC12.46□□□□□ -0.41
Pcdhb18Q91Y02 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb18Q91Y02 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.46□□□□□ -0.41
Pcdhb18Q91Y02 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb18Q91Y02 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb18Q91Y02 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Pcdhb18Q91Y02 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb18Q91Y02 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb18Q91Y02 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.46□□□□□ -0.42
Pcdhb18Q91Y02 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb18Q91Y02 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb18Q91Y02 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb18Q91Y02 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb18Q91Y02 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb18Q91Y02 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb18Q91Y02 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb18Q91Y02 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb18Q91Y02 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb18Q91Y02 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Gm5419-201ENSMUST00000119301 527 ntBASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Gm8194-201ENSMUST00000159783 859 ntBASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Gm9540-201ENSMUST00000188230 478 ntBASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Gm19287-201ENSMUST00000203190 358 ntBASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Gm9463-201ENSMUST00000206707 601 ntBASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb18Q91Y02 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdhb18Q91Y02 Cog3-203ENSMUST00000227473 4197 ntBASIC12.44□□□□□ -0.42
Pcdhb18Q91Y02 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb18Q91Y02 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdhb18Q91Y02 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pcdhb18Q91Y02 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb18Q91Y02 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb18Q91Y02 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.44□□□□□ -0.42
Pcdhb18Q91Y02 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.44□□□□□ -0.42
Pcdhb18Q91Y02 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb18Q91Y02 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb18Q91Y02 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.44□□□□□ -0.42
Pcdhb18Q91Y02 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb18Q91Y02 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pcdhb18Q91Y02 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb18Q91Y02 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.44□□□□□ -0.42
Pcdhb18Q91Y02 Gm11628-201ENSMUST00000117568 171 ntBASIC12.44□□□□□ -0.42
Pcdhb18Q91Y02 Gm14585-201ENSMUST00000120713 634 ntBASIC12.44□□□□□ -0.42
Pcdhb18Q91Y02 Gm15566-201ENSMUST00000121130 590 ntBASIC12.44□□□□□ -0.42
Pcdhb18Q91Y02 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb18Q91Y02 Gm7600-201ENSMUST00000209657 785 ntBASIC12.44□□□□□ -0.42
Pcdhb18Q91Y02 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
Pcdhb18Q91Y02 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.44□□□□□ -0.42
Pcdhb18Q91Y02 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.44□□□□□ -0.42
Pcdhb18Q91Y02 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb18Q91Y02 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb18Q91Y02 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pcdhb18Q91Y02 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms