Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 Mpo-203ENSMUST00000121303 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 Arfgap3-202ENSMUST00000226124 2461 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 AC093022.4-203ENSMUST00000228523 2657 ntBASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Gm5279-201ENSMUST00000199575 745 ntBASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Exoc4-202ENSMUST00000090381 2598 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc9Q8VC31 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC14.27□□□□□ -0.12
Ccdc9Q8VC31 Gm37451-201ENSMUST00000194718 2167 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc9Q8VC31 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc9Q8VC31 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC14.27□□□□□ -0.12
Ccdc9Q8VC31 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc9Q8VC31 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc9Q8VC31 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc9Q8VC31 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Ccdc9Q8VC31 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc9Q8VC31 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc9Q8VC31 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccdc9Q8VC31 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ccdc9Q8VC31 Gm28760-201ENSMUST00000185995 736 ntBASIC14.27□□□□□ -0.13
Ccdc9Q8VC31 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.27□□□□□ -0.13
Ccdc9Q8VC31 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC14.27□□□□□ -0.13
Ccdc9Q8VC31 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.27□□□□□ -0.13
Ccdc9Q8VC31 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc9Q8VC31 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Ccdc9Q8VC31 AC165148.1-201ENSMUST00000224795 2372 ntBASIC14.27□□□□□ -0.13
Ccdc9Q8VC31 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc9Q8VC31 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc9Q8VC31 AC125409.1-201ENSMUST00000223213 3370 ntBASIC14.27□□□□□ -0.13
Ccdc9Q8VC31 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc9Q8VC31 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc9Q8VC31 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.27□□□□□ -0.13
Ccdc9Q8VC31 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc9Q8VC31 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc9Q8VC31 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc9Q8VC31 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc9Q8VC31 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc9Q8VC31 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Ccdc9Q8VC31 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc9Q8VC31 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ccdc9Q8VC31 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ccdc9Q8VC31 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms