Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gm14644-201ENSMUST00000116671 647 ntBASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vcpip1Q8CDG3 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vcpip1Q8CDG3 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vcpip1Q8CDG3 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vcpip1Q8CDG3 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vcpip1Q8CDG3 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.77□□□□□ -0.36
Vcpip1Q8CDG3 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Vcpip1Q8CDG3 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vcpip1Q8CDG3 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vcpip1Q8CDG3 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vcpip1Q8CDG3 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Vcpip1Q8CDG3 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Vcpip1Q8CDG3 Gm12176-201ENSMUST00000121420 875 ntBASIC12.77□□□□□ -0.37
Vcpip1Q8CDG3 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.77□□□□□ -0.37
Vcpip1Q8CDG3 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vcpip1Q8CDG3 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.77□□□□□ -0.37
Vcpip1Q8CDG3 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.77□□□□□ -0.37
Vcpip1Q8CDG3 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.77□□□□□ -0.37
Vcpip1Q8CDG3 Gm8712-201ENSMUST00000221090 701 ntBASIC12.77□□□□□ -0.37
Vcpip1Q8CDG3 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vcpip1Q8CDG3 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vcpip1Q8CDG3 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.77□□□□□ -0.37
Vcpip1Q8CDG3 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vcpip1Q8CDG3 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vcpip1Q8CDG3 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vcpip1Q8CDG3 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vcpip1Q8CDG3 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vcpip1Q8CDG3 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Gm12015-201ENSMUST00000117065 843 ntBASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Gm30285-201ENSMUST00000214614 422 ntBASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Vcpip1Q8CDG3 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Vcpip1Q8CDG3 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms