Protein–RNA interactions for Protein: Q8CBG9

Rnf170, E3 ubiquitin-protein ligase RNF170, mousemouse

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf170Q8CBG9 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Gm4986-201ENSMUST00000119731 549 ntBASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Gm13875-201ENSMUST00000120162 282 ntBASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Gm38158-201ENSMUST00000194617 339 ntBASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Gm9823-201ENSMUST00000051212 327 ntBASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Rnf170Q8CBG9 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Gm11793-201ENSMUST00000120433 981 ntBASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Gm23119-201ENSMUST00000158610 140 ntBASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Gm6013-201ENSMUST00000212264 699 ntBASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Gm10478-201ENSMUST00000084451 396 ntBASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.08□□□□□ -0.8
Rnf170Q8CBG9 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Rnf170Q8CBG9 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf170Q8CBG9 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.07□□□□□ -0.8
Rnf170Q8CBG9 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf170Q8CBG9 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf170Q8CBG9 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf170Q8CBG9 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf170Q8CBG9 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rnf170Q8CBG9 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms