Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.76□□□□□ -0.53
Pcdh8Q7TSK3 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Gm13045-201ENSMUST00000119019 712 ntBASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Gm4034-201ENSMUST00000187674 480 ntBASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdh8Q7TSK3 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Gm11509-201ENSMUST00000117358 325 ntBASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Gm27390-201ENSMUST00000184516 176 ntBASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Gm2965-201ENSMUST00000198365 343 ntBASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Gm29787-201ENSMUST00000222129 849 ntBASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pcdh8Q7TSK3 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms