Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
Six4Q61321 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.97□□□□□ -0.49
Six4Q61321 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.97□□□□□ -0.49
Six4Q61321 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.97□□□□□ -0.49
Six4Q61321 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six4Q61321 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.97□□□□□ -0.49
Six4Q61321 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six4Q61321 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Six4Q61321 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.97□□□□□ -0.49
Six4Q61321 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.97□□□□□ -0.49
Six4Q61321 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six4Q61321 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six4Q61321 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six4Q61321 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Six4Q61321 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Six4Q61321 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six4Q61321 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Six4Q61321 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six4Q61321 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six4Q61321 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six4Q61321 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six4Q61321 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.97□□□□□ -0.49
Six4Q61321 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Six4Q61321 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six4Q61321 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.97□□□□□ -0.49
Six4Q61321 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Six4Q61321 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.97□□□□□ -0.49
Six4Q61321 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Six4Q61321 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Six4Q61321 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Six4Q61321 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Six4Q61321 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Six4Q61321 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Six4Q61321 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Six4Q61321 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Six4Q61321 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Six4Q61321 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Six4Q61321 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Six4Q61321 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Six4Q61321 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Six4Q61321 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Six4Q61321 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Six4Q61321 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Six4Q61321 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Six4Q61321 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Six4Q61321 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.96□□□□□ -0.49
Six4Q61321 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Six4Q61321 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Six4Q61321 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Six4Q61321 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Six4Q61321 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.96□□□□□ -0.49
Six4Q61321 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.96□□□□□ -0.49
Six4Q61321 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Six4Q61321 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Six4Q61321 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Six4Q61321 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.96□□□□□ -0.49
Six4Q61321 Gm28937-201ENSMUST00000185413 695 ntBASIC11.96□□□□□ -0.49
Six4Q61321 Gm29400-201ENSMUST00000187208 695 ntBASIC11.96□□□□□ -0.49
Six4Q61321 Gm28662-201ENSMUST00000188446 695 ntBASIC11.96□□□□□ -0.49
Six4Q61321 Gm28251-201ENSMUST00000188835 695 ntBASIC11.96□□□□□ -0.49
Six4Q61321 Gm37318-201ENSMUST00000194325 695 ntBASIC11.96□□□□□ -0.49
Six4Q61321 Gm38017-201ENSMUST00000194768 695 ntBASIC11.96□□□□□ -0.49
Six4Q61321 Gm37287-201ENSMUST00000195449 695 ntBASIC11.96□□□□□ -0.49
Six4Q61321 Gm37793-201ENSMUST00000195548 695 ntBASIC11.96□□□□□ -0.49
Six4Q61321 Gm6450-201ENSMUST00000200896 574 ntBASIC11.96□□□□□ -0.49
Six4Q61321 Gm5369-201ENSMUST00000217499 588 ntBASIC11.96□□□□□ -0.49
Six4Q61321 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.96□□□□□ -0.49
Six4Q61321 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Six4Q61321 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Six4Q61321 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Six4Q61321 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Six4Q61321 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Six4Q61321 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.96□□□□□ -0.5
Six4Q61321 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Six4Q61321 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Six4Q61321 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Six4Q61321 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Six4Q61321 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Six4Q61321 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Six4Q61321 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Six4Q61321 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
Six4Q61321 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.95□□□□□ -0.5
Six4Q61321 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Six4Q61321 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Six4Q61321 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Six4Q61321 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.95□□□□□ -0.5
Six4Q61321 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Six4Q61321 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms