Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Shroom1Q5SX79 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shroom1Q5SX79 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Gm5419-201ENSMUST00000119301 527 ntBASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Gm11667-201ENSMUST00000119828 486 ntBASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.65□□□□□ -0.38
Shroom1Q5SX79 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.65□□□□□ -0.38
Shroom1Q5SX79 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.65□□□□□ -0.38
Shroom1Q5SX79 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Shroom1Q5SX79 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Gm9797-202ENSMUST00000218003 294 ntBASIC12.65□□□□□ -0.38
Shroom1Q5SX79 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Shroom1Q5SX79 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Shroom1Q5SX79 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Shroom1Q5SX79 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.65□□□□□ -0.39
Shroom1Q5SX79 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Gm13263-201ENSMUST00000121271 838 ntBASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Gm14665-201ENSMUST00000122294 557 ntBASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Gm42599-201ENSMUST00000201308 469 ntBASIC12.64□□□□□ -0.39
Shroom1Q5SX79 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.64□□□□□ -0.39
Shroom1Q5SX79 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Shroom1Q5SX79 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms