Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Zfp560Q3URI6 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Zfp560Q3URI6 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Zfp560Q3URI6 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Zfp560Q3URI6 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Zfp560Q3URI6 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Zfp560Q3URI6 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Gm2260-201ENSMUST00000184965 657 ntBASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Gm43184-201ENSMUST00000197247 542 ntBASIC11.94□□□□□ -0.5
Zfp560Q3URI6 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Gm19287-201ENSMUST00000203190 358 ntBASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Gm4157-201ENSMUST00000211647 679 ntBASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Zfp560Q3URI6 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Zfp560Q3URI6 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Zfp560Q3URI6 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.93□□□□□ -0.5
Zfp560Q3URI6 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Zfp560Q3URI6 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.93□□□□□ -0.5
Zfp560Q3URI6 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Gm15711-201ENSMUST00000118889 535 ntBASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Gm11660-201ENSMUST00000120955 412 ntBASIC11.93□□□□□ -0.5
Zfp560Q3URI6 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Mir7677-201ENSMUST00000184226 67 ntBASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Gm9136-201ENSMUST00000193368 454 ntBASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Gm18038-201ENSMUST00000197900 485 ntBASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Gm18056-201ENSMUST00000207670 568 ntBASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Gm18061-201ENSMUST00000208350 562 ntBASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Gm18063-201ENSMUST00000208529 568 ntBASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Gm18052-201ENSMUST00000208750 559 ntBASIC11.93□□□□□ -0.5
Zfp560Q3URI6 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Gm5705-201ENSMUST00000066241 711 ntBASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.93□□□□□ -0.5
Zfp560Q3URI6 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms