Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox9Q04887 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox9Q04887 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox9Q04887 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Sox9Q04887 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Sox9Q04887 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox9Q04887 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox9Q04887 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox9Q04887 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Sox9Q04887 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox9Q04887 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Sox9Q04887 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox9Q04887 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox9Q04887 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox9Q04887 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Sox9Q04887 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox9Q04887 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox9Q04887 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox9Q04887 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Sox9Q04887 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox9Q04887 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox9Q04887 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox9Q04887 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox9Q04887 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sox9Q04887 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox9Q04887 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sox9Q04887 Gm9089-201ENSMUST00000122027 526 ntBASIC12.3□□□□□ -0.44
Sox9Q04887 Gm15620-201ENSMUST00000122949 270 ntBASIC12.3□□□□□ -0.44
Sox9Q04887 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sox9Q04887 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox9Q04887 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox9Q04887 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.3□□□□□ -0.44
Sox9Q04887 Gm43854-201ENSMUST00000200418 394 ntBASIC12.3□□□□□ -0.44
Sox9Q04887 Gm5599-201ENSMUST00000209602 788 ntBASIC12.3□□□□□ -0.44
Sox9Q04887 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.3□□□□□ -0.44
Sox9Q04887 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.3□□□□□ -0.44
Sox9Q04887 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox9Q04887 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox9Q04887 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox9Q04887 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.3□□□□□ -0.44
Sox9Q04887 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.3□□□□□ -0.44
Sox9Q04887 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.3□□□□□ -0.44
Sox9Q04887 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.3□□□□□ -0.44
Sox9Q04887 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Sox9Q04887 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox9Q04887 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox9Q04887 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox9Q04887 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Sox9Q04887 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox9Q04887 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox9Q04887 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox9Q04887 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox9Q04887 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox9Q04887 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Sox9Q04887 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Sox9Q04887 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Sox9Q04887 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.3□□□□□ -0.44
Sox9Q04887 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox9Q04887 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox9Q04887 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox9Q04887 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Sox9Q04887 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox9Q04887 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Sox9Q04887 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox9Q04887 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC12.29□□□□□ -0.44
Sox9Q04887 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.29□□□□□ -0.44
Sox9Q04887 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox9Q04887 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox9Q04887 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox9Q04887 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Sox9Q04887 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox9Q04887 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox9Q04887 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Sox9Q04887 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox9Q04887 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox9Q04887 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox9Q04887 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.29□□□□□ -0.44
Sox9Q04887 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Sox9Q04887 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox9Q04887 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Sox9Q04887 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
Sox9Q04887 Gm15615-201ENSMUST00000118876 198 ntBASIC12.29□□□□□ -0.44
Sox9Q04887 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox9Q04887 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC12.29□□□□□ -0.44
Sox9Q04887 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox9Q04887 Gm23675-201ENSMUST00000157311 125 ntBASIC12.29□□□□□ -0.44
Sox9Q04887 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox9Q04887 Gm25677-201ENSMUST00000174983 72 ntBASIC12.29□□□□□ -0.44
Sox9Q04887 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Sox9Q04887 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox9Q04887 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox9Q04887 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Sox9Q04887 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox9Q04887 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox9Q04887 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox9Q04887 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox9Q04887 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Sox9Q04887 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Sox9Q04887 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Sox9Q04887 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms