Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.11□□□□□ -0.47
Thumpd3P97770 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd3P97770 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd3P97770 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd3P97770 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd3P97770 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd3P97770 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd3P97770 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd3P97770 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd3P97770 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Thumpd3P97770 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd3P97770 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd3P97770 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd3P97770 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd3P97770 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd3P97770 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.1□□□□□ -0.47
Thumpd3P97770 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd3P97770 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Thumpd3P97770 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd3P97770 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd3P97770 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Thumpd3P97770 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd3P97770 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Thumpd3P97770 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd3P97770 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd3P97770 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd3P97770 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Thumpd3P97770 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.1□□□□□ -0.47
Thumpd3P97770 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Thumpd3P97770 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.1□□□□□ -0.47
Thumpd3P97770 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.1□□□□□ -0.47
Thumpd3P97770 Gm44958-201ENSMUST00000203734 736 ntBASIC12.1□□□□□ -0.47
Thumpd3P97770 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.1□□□□□ -0.47
Thumpd3P97770 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.1□□□□□ -0.47
Thumpd3P97770 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Thumpd3P97770 Gm45925-201ENSMUST00000218882 744 ntBASIC12.1□□□□□ -0.47
Thumpd3P97770 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.1□□□□□ -0.47
Thumpd3P97770 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd3P97770 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Thumpd3P97770 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Thumpd3P97770 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd3P97770 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd3P97770 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd3P97770 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.1□□□□□ -0.47
Thumpd3P97770 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd3P97770 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Thumpd3P97770 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd3P97770 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd3P97770 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd3P97770 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd3P97770 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd3P97770 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd3P97770 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd3P97770 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd3P97770 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd3P97770 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.1□□□□□ -0.47
Thumpd3P97770 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd3P97770 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.1□□□□□ -0.47
Thumpd3P97770 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd3P97770 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Thumpd3P97770 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Thumpd3P97770 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.09□□□□□ -0.47
Thumpd3P97770 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.09□□□□□ -0.47
Thumpd3P97770 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Thumpd3P97770 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.09□□□□□ -0.47
Thumpd3P97770 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Thumpd3P97770 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Thumpd3P97770 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Thumpd3P97770 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Thumpd3P97770 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Thumpd3P97770 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Thumpd3P97770 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Thumpd3P97770 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Thumpd3P97770 Gm2383-201ENSMUST00000181461 807 ntBASIC12.09□□□□□ -0.47
Thumpd3P97770 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.09□□□□□ -0.47
Thumpd3P97770 Gm2546-201ENSMUST00000182630 991 ntBASIC12.09□□□□□ -0.47
Thumpd3P97770 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.09□□□□□ -0.47
Thumpd3P97770 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.09□□□□□ -0.47
Thumpd3P97770 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.09□□□□□ -0.47
Thumpd3P97770 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Thumpd3P97770 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.09□□□□□ -0.47
Thumpd3P97770 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Thumpd3P97770 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Thumpd3P97770 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Thumpd3P97770 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Thumpd3P97770 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Thumpd3P97770 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Thumpd3P97770 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Thumpd3P97770 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Thumpd3P97770 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.47
Thumpd3P97770 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.47
Thumpd3P97770 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Thumpd3P97770 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
Thumpd3P97770 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.08□□□□□ -0.47
Thumpd3P97770 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.08□□□□□ -0.47
Thumpd3P97770 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Thumpd3P97770 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.08□□□□□ -0.48
Thumpd3P97770 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Thumpd3P97770 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Thumpd3P97770 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms