Protein–RNA interactions for Protein: P82348

Sgcg, Gamma-sarcoglycan, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcgP82348 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
SgcgP82348 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcgP82348 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcgP82348 Gm9796-201ENSMUST00000062249 2250 ntBASIC11.74□□□□□ -0.53
SgcgP82348 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcgP82348 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcgP82348 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcgP82348 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SgcgP82348 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcgP82348 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcgP82348 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcgP82348 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcgP82348 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcgP82348 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcgP82348 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcgP82348 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.73□□□□□ -0.53
SgcgP82348 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcgP82348 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcgP82348 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcgP82348 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcgP82348 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcgP82348 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.73□□□□□ -0.53
SgcgP82348 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcgP82348 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcgP82348 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcgP82348 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcgP82348 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.73□□□□□ -0.53
SgcgP82348 Mir7686-201ENSMUST00000200604 57 ntBASIC11.73□□□□□ -0.53
SgcgP82348 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.73□□□□□ -0.53
SgcgP82348 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.73□□□□□ -0.53
SgcgP82348 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
SgcgP82348 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
SgcgP82348 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.73□□□□□ -0.53
SgcgP82348 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.73□□□□□ -0.53
SgcgP82348 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.73□□□□□ -0.53
SgcgP82348 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.73□□□□□ -0.53
SgcgP82348 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.73□□□□□ -0.53
SgcgP82348 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SgcgP82348 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcgP82348 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcgP82348 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcgP82348 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcgP82348 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcgP82348 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcgP82348 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
SgcgP82348 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SgcgP82348 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcgP82348 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.72□□□□□ -0.53
SgcgP82348 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcgP82348 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SgcgP82348 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcgP82348 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcgP82348 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.72□□□□□ -0.53
SgcgP82348 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.72□□□□□ -0.53
SgcgP82348 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
SgcgP82348 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
SgcgP82348 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SgcgP82348 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SgcgP82348 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SgcgP82348 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcgP82348 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.72□□□□□ -0.53
SgcgP82348 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcgP82348 Gm15573-201ENSMUST00000119487 540 ntBASIC11.72□□□□□ -0.53
SgcgP82348 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SgcgP82348 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SgcgP82348 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SgcgP82348 Gm19459-201ENSMUST00000176240 835 ntBASIC11.72□□□□□ -0.53
SgcgP82348 Gm10774-201ENSMUST00000188689 204 ntBASIC11.72□□□□□ -0.53
SgcgP82348 Gm37835-201ENSMUST00000193305 361 ntBASIC11.72□□□□□ -0.53
SgcgP82348 Gm19287-201ENSMUST00000203190 358 ntBASIC11.72□□□□□ -0.53
SgcgP82348 Gm44126-201ENSMUST00000204831 514 ntBASIC11.72□□□□□ -0.53
SgcgP82348 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.72□□□□□ -0.53
SgcgP82348 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.72□□□□□ -0.53
SgcgP82348 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.72□□□□□ -0.53
SgcgP82348 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.72□□□□□ -0.53
SgcgP82348 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcgP82348 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
SgcgP82348 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcgP82348 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcgP82348 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SgcgP82348 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SgcgP82348 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcgP82348 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcgP82348 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcgP82348 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
SgcgP82348 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SgcgP82348 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
SgcgP82348 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.72□□□□□ -0.53
SgcgP82348 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcgP82348 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcgP82348 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SgcgP82348 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.72□□□□□ -0.53
SgcgP82348 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcgP82348 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
SgcgP82348 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
SgcgP82348 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcgP82348 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcgP82348 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.72□□□□□ -0.53
SgcgP82348 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
SgcgP82348 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms