Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Shox2P70390 Gm42937-201ENSMUST00000197360 752 ntBASIC11.71□□□□□ -0.53
Shox2P70390 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Shox2P70390 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.71□□□□□ -0.53
Shox2P70390 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shox2P70390 Gm10146-201ENSMUST00000072739 309 ntBASIC11.71□□□□□ -0.53
Shox2P70390 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Shox2P70390 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Shox2P70390 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shox2P70390 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Shox2P70390 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.71□□□□□ -0.54
Shox2P70390 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Shox2P70390 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Shox2P70390 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.71□□□□□ -0.54
Shox2P70390 Gm43999-201ENSMUST00000204286 2889 ntBASIC11.71□□□□□ -0.54
Shox2P70390 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shox2P70390 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Shox2P70390 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Shox2P70390 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shox2P70390 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shox2P70390 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Shox2P70390 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Shox2P70390 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.7□□□□□ -0.54
Shox2P70390 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Shox2P70390 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.7□□□□□ -0.54
Shox2P70390 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Shox2P70390 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC11.7□□□□□ -0.54
Shox2P70390 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shox2P70390 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.7□□□□□ -0.54
Shox2P70390 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shox2P70390 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shox2P70390 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shox2P70390 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shox2P70390 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Shox2P70390 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Shox2P70390 Syt7-204ENSMUST00000223586 1344 ntBASIC11.7□□□□□ -0.54
Shox2P70390 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Shox2P70390 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shox2P70390 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shox2P70390 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.7□□□□□ -0.54
Shox2P70390 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Shox2P70390 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.7□□□□□ -0.54
Shox2P70390 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Shox2P70390 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.7□□□□□ -0.54
Shox2P70390 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Shox2P70390 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.7□□□□□ -0.54
Shox2P70390 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shox2P70390 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shox2P70390 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.7□□□□□ -0.54
Shox2P70390 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shox2P70390 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Shox2P70390 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Shox2P70390 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shox2P70390 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.7□□□□□ -0.54
Shox2P70390 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Shox2P70390 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.7□□□□□ -0.54
Shox2P70390 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Shox2P70390 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shox2P70390 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Shox2P70390 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shox2P70390 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shox2P70390 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shox2P70390 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Shox2P70390 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shox2P70390 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shox2P70390 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.69□□□□□ -0.54
Shox2P70390 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.69□□□□□ -0.54
Shox2P70390 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shox2P70390 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.69□□□□□ -0.54
Shox2P70390 Erich3-203ENSMUST00000189969 3460 ntBASIC11.69□□□□□ -0.54
Shox2P70390 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shox2P70390 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shox2P70390 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shox2P70390 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shox2P70390 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.69□□□□□ -0.54
Shox2P70390 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shox2P70390 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shox2P70390 Gm28693-201ENSMUST00000189622 2638 ntBASIC11.69□□□□□ -0.54
Shox2P70390 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shox2P70390 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shox2P70390 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shox2P70390 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shox2P70390 Gm13369-201ENSMUST00000119442 987 ntBASIC11.69□□□□□ -0.54
Shox2P70390 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.69□□□□□ -0.54
Shox2P70390 Rprl1-201ENSMUST00000158050 327 ntBASIC11.69□□□□□ -0.54
Shox2P70390 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.69□□□□□ -0.54
Shox2P70390 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.69□□□□□ -0.54
Shox2P70390 Gm28631-201ENSMUST00000190740 334 ntBASIC11.69□□□□□ -0.54
Shox2P70390 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.69□□□□□ -0.54
Shox2P70390 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.69□□□□□ -0.54
Shox2P70390 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Shox2P70390 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Shox2P70390 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shox2P70390 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.69□□□□□ -0.54
Shox2P70390 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shox2P70390 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Shox2P70390 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shox2P70390 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Shox2P70390 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC11.69□□□□□ -0.54
Shox2P70390 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms