Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.12□□□□□ -0.31
Hmgb1P63158 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgb1P63158 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgb1P63158 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.12□□□□□ -0.31
Hmgb1P63158 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.12□□□□□ -0.31
Hmgb1P63158 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.12□□□□□ -0.31
Hmgb1P63158 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.12□□□□□ -0.31
Hmgb1P63158 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.12□□□□□ -0.31
Hmgb1P63158 Gm30285-201ENSMUST00000214614 422 ntBASIC13.12□□□□□ -0.31
Hmgb1P63158 Gm8712-201ENSMUST00000221090 701 ntBASIC13.12□□□□□ -0.31
Hmgb1P63158 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgb1P63158 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgb1P63158 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Hmgb1P63158 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgb1P63158 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgb1P63158 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgb1P63158 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgb1P63158 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgb1P63158 Gm45776-201ENSMUST00000212366 1522 ntBASIC13.12□□□□□ -0.31
Hmgb1P63158 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgb1P63158 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgb1P63158 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC13.12□□□□□ -0.31
Hmgb1P63158 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Hmgb1P63158 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hmgb1P63158 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hmgb1P63158 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hmgb1P63158 Gm9877-201ENSMUST00000064271 2627 ntBASIC13.11□□□□□ -0.31
Hmgb1P63158 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Hmgb1P63158 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Hmgb1P63158 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Hmgb1P63158 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hmgb1P63158 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hmgb1P63158 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hmgb1P63158 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hmgb1P63158 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Hmgb1P63158 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hmgb1P63158 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hmgb1P63158 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hmgb1P63158 Gm11989-201ENSMUST00000117240 672 ntBASIC13.11□□□□□ -0.31
Hmgb1P63158 Gm11362-201ENSMUST00000118838 850 ntBASIC13.11□□□□□ -0.31
Hmgb1P63158 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hmgb1P63158 Gm7722-201ENSMUST00000120646 741 ntBASIC13.11□□□□□ -0.31
Hmgb1P63158 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.11□□□□□ -0.31
Hmgb1P63158 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
Hmgb1P63158 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hmgb1P63158 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.11□□□□□ -0.31
Hmgb1P63158 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC13.11□□□□□ -0.31
Hmgb1P63158 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Hmgb1P63158 Gm18893-201ENSMUST00000198416 943 ntBASIC13.11□□□□□ -0.31
Hmgb1P63158 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Hmgb1P63158 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hmgb1P63158 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hmgb1P63158 Gm9823-201ENSMUST00000051212 327 ntBASIC13.11□□□□□ -0.31
Hmgb1P63158 Gm25857-201ENSMUST00000082788 129 ntBASIC13.11□□□□□ -0.31
Hmgb1P63158 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hmgb1P63158 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hmgb1P63158 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hmgb1P63158 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC13.11□□□□□ -0.31
Hmgb1P63158 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hmgb1P63158 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Hmgb1P63158 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC13.11□□□□□ -0.31
Hmgb1P63158 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hmgb1P63158 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
Hmgb1P63158 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hmgb1P63158 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hmgb1P63158 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hmgb1P63158 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Hmgb1P63158 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.11□□□□□ -0.31
Hmgb1P63158 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hmgb1P63158 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Hmgb1P63158 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.1□□□□□ -0.31
Hmgb1P63158 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hmgb1P63158 Gm38227-201ENSMUST00000193036 1602 ntBASIC13.1□□□□□ -0.31
Hmgb1P63158 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Hmgb1P63158 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hmgb1P63158 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Hmgb1P63158 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Hmgb1P63158 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hmgb1P63158 AC126257.2-201ENSMUST00000215507 2300 ntBASIC13.1□□□□□ -0.31
Hmgb1P63158 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hmgb1P63158 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hmgb1P63158 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC13.1□□□□□ -0.31
Hmgb1P63158 Gm12742-201ENSMUST00000117326 410 ntBASIC13.1□□□□□ -0.31
Hmgb1P63158 Gm12957-201ENSMUST00000117835 377 ntBASIC13.1□□□□□ -0.31
Hmgb1P63158 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.1□□□□□ -0.31
Hmgb1P63158 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hmgb1P63158 Gm6114-201ENSMUST00000182472 968 ntBASIC13.1□□□□□ -0.31
Hmgb1P63158 Gm3096-201ENSMUST00000185770 364 ntBASIC13.1□□□□□ -0.31
Hmgb1P63158 Gm18935-201ENSMUST00000212692 664 ntBASIC13.1□□□□□ -0.31
Hmgb1P63158 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.1□□□□□ -0.31
Hmgb1P63158 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.1□□□□□ -0.31
Hmgb1P63158 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hmgb1P63158 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hmgb1P63158 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC13.1□□□□□ -0.31
Hmgb1P63158 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hmgb1P63158 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hmgb1P63158 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.1□□□□□ -0.31
Hmgb1P63158 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Hmgb1P63158 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Hmgb1P63158 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms