Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.16□□□□□ -0.46
Sox1P53783 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.16□□□□□ -0.46
Sox1P53783 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox1P53783 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox1P53783 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox1P53783 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox1P53783 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox1P53783 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox1P53783 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox1P53783 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Sox1P53783 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox1P53783 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC12.16□□□□□ -0.46
Sox1P53783 Gm13039-201ENSMUST00000118638 794 ntBASIC12.16□□□□□ -0.46
Sox1P53783 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox1P53783 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC12.16□□□□□ -0.46
Sox1P53783 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sox1P53783 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC12.16□□□□□ -0.46
Sox1P53783 Gm17944-201ENSMUST00000186351 643 ntBASIC12.16□□□□□ -0.46
Sox1P53783 Gm18552-201ENSMUST00000187425 538 ntBASIC12.16□□□□□ -0.46
Sox1P53783 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC12.16□□□□□ -0.46
Sox1P53783 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.16□□□□□ -0.46
Sox1P53783 Gm17936-201ENSMUST00000199413 988 ntBASIC12.16□□□□□ -0.46
Sox1P53783 Gm43866-201ENSMUST00000203894 839 ntBASIC12.16□□□□□ -0.46
Sox1P53783 AC164099.1-201ENSMUST00000227780 333 ntBASIC12.16□□□□□ -0.46
Sox1P53783 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox1P53783 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.16□□□□□ -0.46
Sox1P53783 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox1P53783 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Sox1P53783 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.16□□□□□ -0.46
Sox1P53783 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox1P53783 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox1P53783 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox1P53783 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Sox1P53783 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox1P53783 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC12.16□□□□□ -0.46
Sox1P53783 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sox1P53783 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox1P53783 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sox1P53783 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.15□□□□□ -0.46
Sox1P53783 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sox1P53783 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Sox1P53783 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 Gm23612-201ENSMUST00000103823 110 ntBASIC12.15□□□□□ -0.46
Sox1P53783 Gm23604-201ENSMUST00000104311 132 ntBASIC12.15□□□□□ -0.46
Sox1P53783 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Sox1P53783 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Sox1P53783 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.15□□□□□ -0.46
Sox1P53783 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC12.15□□□□□ -0.46
Sox1P53783 Gm16030-201ENSMUST00000159098 603 ntBASIC12.15□□□□□ -0.46
Sox1P53783 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 Gm6612-201ENSMUST00000170777 395 ntBASIC12.15□□□□□ -0.46
Sox1P53783 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC12.15□□□□□ -0.46
Sox1P53783 Gm23576-201ENSMUST00000179918 110 ntBASIC12.15□□□□□ -0.46
Sox1P53783 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.15□□□□□ -0.46
Sox1P53783 Gm5210-201ENSMUST00000182150 1010 ntBASIC12.15□□□□□ -0.46
Sox1P53783 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.15□□□□□ -0.46
Sox1P53783 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC12.15□□□□□ -0.46
Sox1P53783 Gm8234-201ENSMUST00000198523 1107 ntBASIC12.15□□□□□ -0.46
Sox1P53783 Gm18711-201ENSMUST00000199341 750 ntBASIC12.15□□□□□ -0.46
Sox1P53783 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Sox1P53783 Gm18256-201ENSMUST00000209087 907 ntBASIC12.15□□□□□ -0.46
Sox1P53783 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC12.15□□□□□ -0.46
Sox1P53783 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC12.15□□□□□ -0.46
Sox1P53783 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.15□□□□□ -0.46
Sox1P53783 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sox1P53783 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sox1P53783 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sox1P53783 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sox1P53783 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Sox1P53783 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sox1P53783 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.15□□□□□ -0.47
Sox1P53783 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms