Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Prox1P48437 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Prox1P48437 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Prox1P48437 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Prox1P48437 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Prox1P48437 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.43□□□□□ -0.58
Prox1P48437 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Prox1P48437 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Prox1P48437 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.43□□□□□ -0.58
Prox1P48437 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Prox1P48437 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Prox1P48437 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.43□□□□□ -0.58
Prox1P48437 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Prox1P48437 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Prox1P48437 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Prox1P48437 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Prox1P48437 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Prox1P48437 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Prox1P48437 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Prox1P48437 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.43□□□□□ -0.58
Prox1P48437 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.43□□□□□ -0.58
Prox1P48437 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Prox1P48437 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prox1P48437 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prox1P48437 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Prox1P48437 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.42□□□□□ -0.58
Prox1P48437 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prox1P48437 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prox1P48437 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Prox1P48437 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prox1P48437 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prox1P48437 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Prox1P48437 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prox1P48437 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prox1P48437 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Prox1P48437 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prox1P48437 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prox1P48437 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prox1P48437 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prox1P48437 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.42□□□□□ -0.58
Prox1P48437 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Prox1P48437 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.42□□□□□ -0.58
Prox1P48437 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.42□□□□□ -0.58
Prox1P48437 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.42□□□□□ -0.58
Prox1P48437 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.42□□□□□ -0.58
Prox1P48437 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Prox1P48437 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Prox1P48437 Gm18304-201ENSMUST00000189162 546 ntBASIC11.42□□□□□ -0.58
Prox1P48437 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Prox1P48437 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC11.42□□□□□ -0.58
Prox1P48437 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Prox1P48437 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prox1P48437 Rgr-203ENSMUST00000225070 4704 ntBASIC11.42□□□□□ -0.58
Prox1P48437 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prox1P48437 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Prox1P48437 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Prox1P48437 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Prox1P48437 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Prox1P48437 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.42□□□□□ -0.58
Prox1P48437 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prox1P48437 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prox1P48437 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prox1P48437 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Prox1P48437 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.42□□□□□ -0.58
Prox1P48437 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.42□□□□□ -0.58
Prox1P48437 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prox1P48437 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prox1P48437 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Prox1P48437 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Prox1P48437 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prox1P48437 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Prox1P48437 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Prox1P48437 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Prox1P48437 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prox1P48437 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Prox1P48437 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prox1P48437 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Prox1P48437 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Prox1P48437 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Prox1P48437 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Prox1P48437 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.41□□□□□ -0.58
Prox1P48437 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prox1P48437 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prox1P48437 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.41□□□□□ -0.58
Prox1P48437 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Prox1P48437 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prox1P48437 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prox1P48437 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prox1P48437 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Prox1P48437 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Prox1P48437 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.41□□□□□ -0.58
Prox1P48437 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Prox1P48437 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Prox1P48437 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Prox1P48437 Gm1335-201ENSMUST00000121653 386 ntBASIC11.41□□□□□ -0.58
Prox1P48437 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Prox1P48437 Gm44405-201ENSMUST00000198952 126 ntBASIC11.41□□□□□ -0.58
Prox1P48437 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.41□□□□□ -0.58
Prox1P48437 Gm18584-201ENSMUST00000203098 964 ntBASIC11.41□□□□□ -0.58
Prox1P48437 Gm44958-201ENSMUST00000203734 736 ntBASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms