Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Nkx2-6P43688 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.25□□□□□ -0.61
Nkx2-6P43688 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.25□□□□□ -0.61
Nkx2-6P43688 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Gm15352-201ENSMUST00000118696 270 ntBASIC11.25□□□□□ -0.61
Nkx2-6P43688 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.25□□□□□ -0.61
Nkx2-6P43688 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-6P43688 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.25□□□□□ -0.61
Nkx2-6P43688 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.25□□□□□ -0.61
Nkx2-6P43688 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.24□□□□□ -0.61
Nkx2-6P43688 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.24□□□□□ -0.61
Nkx2-6P43688 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.24□□□□□ -0.61
Nkx2-6P43688 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Gm15610-201ENSMUST00000120584 195 ntBASIC11.24□□□□□ -0.61
Nkx2-6P43688 Gm14585-201ENSMUST00000120713 634 ntBASIC11.24□□□□□ -0.61
Nkx2-6P43688 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Gm22144-201ENSMUST00000157402 102 ntBASIC11.24□□□□□ -0.61
Nkx2-6P43688 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.24□□□□□ -0.61
Nkx2-6P43688 Gm28686-201ENSMUST00000187404 609 ntBASIC11.24□□□□□ -0.61
Nkx2-6P43688 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.24□□□□□ -0.61
Nkx2-6P43688 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Gm45575-201ENSMUST00000210283 548 ntBASIC11.24□□□□□ -0.61
Nkx2-6P43688 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.24□□□□□ -0.61
Nkx2-6P43688 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.24□□□□□ -0.61
Nkx2-6P43688 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Nkx2-6P43688 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms