Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cd27P41272 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cd27P41272 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cd27P41272 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cd27P41272 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cd27P41272 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cd27P41272 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Gm37542-201ENSMUST00000192563 2832 ntBASIC9.55□□□□□ -0.88
Cd27P41272 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Cd27P41272 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC9.55□□□□□ -0.88
Cd27P41272 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Cd27P41272 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Gm15515-201ENSMUST00000117827 822 ntBASIC9.55□□□□□ -0.88
Cd27P41272 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC9.55□□□□□ -0.88
Cd27P41272 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC9.55□□□□□ -0.88
Cd27P41272 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC9.55□□□□□ -0.88
Cd27P41272 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC9.55□□□□□ -0.88
Cd27P41272 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Gm27552-201ENSMUST00000183351 62 ntBASIC9.55□□□□□ -0.88
Cd27P41272 Gm27844-201ENSMUST00000183613 62 ntBASIC9.55□□□□□ -0.88
Cd27P41272 Gm28071-201ENSMUST00000190355 478 ntBASIC9.55□□□□□ -0.88
Cd27P41272 Gm42629-201ENSMUST00000199063 1102 ntBASIC9.55□□□□□ -0.88
Cd27P41272 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Gm4157-201ENSMUST00000211647 679 ntBASIC9.55□□□□□ -0.88
Cd27P41272 Gm18212-201ENSMUST00000211678 889 ntBASIC9.55□□□□□ -0.88
Cd27P41272 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC9.55□□□□□ -0.88
Cd27P41272 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC9.55□□□□□ -0.88
Cd27P41272 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC9.55□□□□□ -0.88
Cd27P41272 Gm5846-201ENSMUST00000193146 1414 ntBASIC9.55□□□□□ -0.88
Cd27P41272 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Cd27P41272 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC9.55□□□□□ -0.88
Cd27P41272 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC9.55□□□□□ -0.88
Cd27P41272 Gm37600-201ENSMUST00000193764 3292 ntBASIC9.55□□□□□ -0.88
Cd27P41272 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Cd27P41272 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cd27P41272 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cd27P41272 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cd27P41272 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cd27P41272 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cd27P41272 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Cd27P41272 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cd27P41272 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cd27P41272 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cd27P41272 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cd27P41272 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Cd27P41272 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cd27P41272 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cd27P41272 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cd27P41272 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cd27P41272 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cd27P41272 Gm38194-201ENSMUST00000194529 2211 ntBASIC9.54□□□□□ -0.88
Cd27P41272 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cd27P41272 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Cd27P41272 Gm23596-201ENSMUST00000104304 132 ntBASIC9.54□□□□□ -0.88
Cd27P41272 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cd27P41272 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cd27P41272 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
Cd27P41272 Gm16481-201ENSMUST00000119074 1227 ntBASIC9.54□□□□□ -0.88
Cd27P41272 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Cd27P41272 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC9.54□□□□□ -0.88
Cd27P41272 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC9.54□□□□□ -0.88
Cd27P41272 Gm3332-201ENSMUST00000189337 928 ntBASIC9.54□□□□□ -0.88
Cd27P41272 Gm38228-201ENSMUST00000193169 1293 ntBASIC9.54□□□□□ -0.88
Cd27P41272 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC9.54□□□□□ -0.88
Cd27P41272 Gm19287-201ENSMUST00000203190 358 ntBASIC9.54□□□□□ -0.88
Cd27P41272 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cd27P41272 Gm5363-201ENSMUST00000211927 938 ntBASIC9.54□□□□□ -0.88
Cd27P41272 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cd27P41272 AC131586.1-201ENSMUST00000228844 2964 ntBASIC9.54□□□□□ -0.88
Cd27P41272 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cd27P41272 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms