Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
TP20293 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.23□□□□□ -0.61
TP20293 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
TP20293 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.23□□□□□ -0.61
TP20293 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.23□□□□□ -0.61
TP20293 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
TP20293 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.23□□□□□ -0.61
TP20293 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
TP20293 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.23□□□□□ -0.61
TP20293 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.23□□□□□ -0.61
TP20293 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.23□□□□□ -0.61
TP20293 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.23□□□□□ -0.61
TP20293 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
TP20293 Gm5070-201ENSMUST00000177599 862 ntBASIC11.23□□□□□ -0.61
TP20293 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.23□□□□□ -0.61
TP20293 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
TP20293 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
TP20293 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.23□□□□□ -0.61
TP20293 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
TP20293 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
TP20293 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
TP20293 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
TP20293 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.23□□□□□ -0.61
TP20293 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TP20293 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.23□□□□□ -0.61
TP20293 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.22□□□□□ -0.61
TP20293 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
TP20293 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TP20293 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
TP20293 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
TP20293 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TP20293 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
TP20293 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TP20293 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
TP20293 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TP20293 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TP20293 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TP20293 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TP20293 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
TP20293 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TP20293 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
TP20293 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TP20293 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.22□□□□□ -0.61
TP20293 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.22□□□□□ -0.61
TP20293 Rprl1-201ENSMUST00000158050 327 ntBASIC11.22□□□□□ -0.61
TP20293 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
TP20293 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
TP20293 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.22□□□□□ -0.61
TP20293 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TP20293 Mir6420-201ENSMUST00000185032 102 ntBASIC11.22□□□□□ -0.61
TP20293 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TP20293 Rprl1-202ENSMUST00000198476 238 ntBASIC11.22□□□□□ -0.61
TP20293 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.22□□□□□ -0.61
TP20293 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.22□□□□□ -0.61
TP20293 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.22□□□□□ -0.61
TP20293 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TP20293 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TP20293 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.22□□□□□ -0.61
TP20293 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.22□□□□□ -0.61
TP20293 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TP20293 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TP20293 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TP20293 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TP20293 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TP20293 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TP20293 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TP20293 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms