Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc6P10629 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc6P10629 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hoxc6P10629 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc6P10629 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc6P10629 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc6P10629 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc6P10629 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc6P10629 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc6P10629 Gm13549-201ENSMUST00000118339 796 ntBASIC13.15□□□□□ -0.3
Hoxc6P10629 Gm10169-201ENSMUST00000121822 348 ntBASIC13.15□□□□□ -0.3
Hoxc6P10629 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc6P10629 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Hoxc6P10629 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC13.15□□□□□ -0.3
Hoxc6P10629 Ighv2-1-201ENSMUST00000170946 353 ntBASIC13.15□□□□□ -0.3
Hoxc6P10629 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc6P10629 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Hoxc6P10629 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC13.15□□□□□ -0.3
Hoxc6P10629 Gm45758-201ENSMUST00000212448 1006 ntBASIC13.15□□□□□ -0.3
Hoxc6P10629 AC168279.1-201ENSMUST00000214611 382 ntBASIC13.15□□□□□ -0.3
Hoxc6P10629 AC122346.3-201ENSMUST00000223983 306 ntBASIC13.15□□□□□ -0.3
Hoxc6P10629 AC118639.2-201ENSMUST00000226289 223 ntBASIC13.15□□□□□ -0.3
Hoxc6P10629 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc6P10629 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc6P10629 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc6P10629 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc6P10629 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Hoxc6P10629 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.15□□□□□ -0.3
Hoxc6P10629 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hoxc6P10629 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc6P10629 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Hoxc6P10629 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Hoxc6P10629 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Hoxc6P10629 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc6P10629 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Hoxc6P10629 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
Hoxc6P10629 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc6P10629 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Hoxc6P10629 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hoxc6P10629 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Hoxc6P10629 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Hoxc6P10629 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc6P10629 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc6P10629 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc6P10629 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc6P10629 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.14□□□□□ -0.31
Hoxc6P10629 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc6P10629 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc6P10629 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC13.14□□□□□ -0.31
Hoxc6P10629 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Hoxc6P10629 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc6P10629 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc6P10629 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Hoxc6P10629 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc6P10629 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc6P10629 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Hoxc6P10629 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc6P10629 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc6P10629 Gm12030-201ENSMUST00000121917 223 ntBASIC13.14□□□□□ -0.31
Hoxc6P10629 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC13.14□□□□□ -0.31
Hoxc6P10629 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC13.14□□□□□ -0.31
Hoxc6P10629 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc6P10629 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC13.14□□□□□ -0.31
Hoxc6P10629 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC13.14□□□□□ -0.31
Hoxc6P10629 Gm9135-201ENSMUST00000182963 990 ntBASIC13.14□□□□□ -0.31
Hoxc6P10629 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Hoxc6P10629 Gm3726-201ENSMUST00000203110 785 ntBASIC13.14□□□□□ -0.31
Hoxc6P10629 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.14□□□□□ -0.31
Hoxc6P10629 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.14□□□□□ -0.31
Hoxc6P10629 AC114645.1-201ENSMUST00000215831 187 ntBASIC13.14□□□□□ -0.31
Hoxc6P10629 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.14□□□□□ -0.31
Hoxc6P10629 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Hoxc6P10629 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Hoxc6P10629 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Hoxc6P10629 Gm23105-201ENSMUST00000083719 134 ntBASIC13.14□□□□□ -0.31
Hoxc6P10629 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc6P10629 Gm17213-201ENSMUST00000165161 1360 ntBASIC13.14□□□□□ -0.31
Hoxc6P10629 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc6P10629 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc6P10629 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Hoxc6P10629 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Hoxc6P10629 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.14□□□□□ -0.31
Hoxc6P10629 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc6P10629 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc6P10629 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Hoxc6P10629 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc6P10629 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc6P10629 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc6P10629 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc6P10629 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc6P10629 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Hoxc6P10629 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc6P10629 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Hoxc6P10629 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc6P10629 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc6P10629 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc6P10629 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc6P10629 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Hoxc6P10629 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Hoxc6P10629 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms