Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.23□□□□□ -0.45
CopeO89079 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
CopeO89079 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CopeO89079 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CopeO89079 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CopeO89079 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
CopeO89079 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopeO89079 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CopeO89079 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopeO89079 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
CopeO89079 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopeO89079 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopeO89079 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopeO89079 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.22□□□□□ -0.45
CopeO89079 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopeO89079 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.22□□□□□ -0.45
CopeO89079 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.22□□□□□ -0.45
CopeO89079 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopeO89079 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopeO89079 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC12.22□□□□□ -0.45
CopeO89079 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopeO89079 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
CopeO89079 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.22□□□□□ -0.45
CopeO89079 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.22□□□□□ -0.45
CopeO89079 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.22□□□□□ -0.45
CopeO89079 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CopeO89079 Mir1247-201ENSMUST00000116706 82 ntBASIC12.22□□□□□ -0.45
CopeO89079 Gm11439-201ENSMUST00000118598 409 ntBASIC12.22□□□□□ -0.45
CopeO89079 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.22□□□□□ -0.45
CopeO89079 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CopeO89079 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.22□□□□□ -0.45
CopeO89079 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CopeO89079 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.22□□□□□ -0.45
CopeO89079 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.22□□□□□ -0.45
CopeO89079 Gm43002-201ENSMUST00000200310 155 ntBASIC12.22□□□□□ -0.45
CopeO89079 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.22□□□□□ -0.45
CopeO89079 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.22□□□□□ -0.45
CopeO89079 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
CopeO89079 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.22□□□□□ -0.45
CopeO89079 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.22□□□□□ -0.45
CopeO89079 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopeO89079 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopeO89079 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopeO89079 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.22□□□□□ -0.45
CopeO89079 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopeO89079 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CopeO89079 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.22□□□□□ -0.45
CopeO89079 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopeO89079 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CopeO89079 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
CopeO89079 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CopeO89079 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CopeO89079 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CopeO89079 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CopeO89079 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.21□□□□□ -0.45
CopeO89079 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CopeO89079 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CopeO89079 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CopeO89079 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CopeO89079 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CopeO89079 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CopeO89079 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
CopeO89079 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CopeO89079 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
CopeO89079 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
CopeO89079 Gm6114-201ENSMUST00000182472 968 ntBASIC12.21□□□□□ -0.45
CopeO89079 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.21□□□□□ -0.45
CopeO89079 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
CopeO89079 Gm7653-201ENSMUST00000214567 508 ntBASIC12.21□□□□□ -0.45
CopeO89079 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CopeO89079 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.21□□□□□ -0.45
CopeO89079 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
CopeO89079 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CopeO89079 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CopeO89079 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CopeO89079 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CopeO89079 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.21□□□□□ -0.45
CopeO89079 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CopeO89079 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CopeO89079 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CopeO89079 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CopeO89079 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
CopeO89079 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CopeO89079 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
CopeO89079 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
CopeO89079 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
CopeO89079 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
CopeO89079 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CopeO89079 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CopeO89079 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.21□□□□□ -0.46
CopeO89079 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
CopeO89079 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CopeO89079 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
CopeO89079 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
CopeO89079 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CopeO89079 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CopeO89079 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopeO89079 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopeO89079 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CopeO89079 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms