Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC9.39□□□□□ -0.91
Efnb3O35393 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Efnb3O35393 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Efnb3O35393 Gm37969-201ENSMUST00000195777 3409 ntBASIC9.39□□□□□ -0.91
Efnb3O35393 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC9.39□□□□□ -0.91
Efnb3O35393 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Efnb3O35393 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 Gm11439-201ENSMUST00000118598 409 ntBASIC9.39□□□□□ -0.91
Efnb3O35393 Gm11425-201ENSMUST00000119608 498 ntBASIC9.39□□□□□ -0.91
Efnb3O35393 Gm13342-201ENSMUST00000121055 207 ntBASIC9.39□□□□□ -0.91
Efnb3O35393 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC9.39□□□□□ -0.91
Efnb3O35393 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC9.39□□□□□ -0.91
Efnb3O35393 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC9.39□□□□□ -0.91
Efnb3O35393 Gm8494-201ENSMUST00000178171 1233 ntBASIC9.39□□□□□ -0.91
Efnb3O35393 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Efnb3O35393 Gm39404-201ENSMUST00000216350 313 ntBASIC9.39□□□□□ -0.91
Efnb3O35393 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 AC126253.1-201ENSMUST00000227974 824 ntBASIC9.39□□□□□ -0.91
Efnb3O35393 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC9.39□□□□□ -0.91
Efnb3O35393 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Efnb3O35393 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Efnb3O35393 Gm9396-201ENSMUST00000076703 567 ntBASIC9.39□□□□□ -0.91
Efnb3O35393 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC9.39□□□□□ -0.91
Efnb3O35393 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Efnb3O35393 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC9.39□□□□□ -0.91
Efnb3O35393 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 Gm28719-201ENSMUST00000187779 1757 ntBASIC9.39□□□□□ -0.91
Efnb3O35393 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.39□□□□□ -0.91
Efnb3O35393 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Efnb3O35393 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Efnb3O35393 Gm44152-201ENSMUST00000205007 1691 ntBASIC9.39□□□□□ -0.91
Efnb3O35393 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC9.38□□□□□ -0.91
Efnb3O35393 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Gm5620-201ENSMUST00000077991 1348 ntBASIC9.38□□□□□ -0.91
Efnb3O35393 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC9.38□□□□□ -0.91
Efnb3O35393 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Efnb3O35393 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Efnb3O35393 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Gm24934-201ENSMUST00000103764 111 ntBASIC9.38□□□□□ -0.91
Efnb3O35393 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Gm13736-201ENSMUST00000119272 253 ntBASIC9.38□□□□□ -0.91
Efnb3O35393 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Efnb3O35393 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Efnb3O35393 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC9.38□□□□□ -0.91
Efnb3O35393 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Efnb3O35393 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC9.38□□□□□ -0.91
Efnb3O35393 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC9.38□□□□□ -0.91
Efnb3O35393 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Efnb3O35393 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC9.38□□□□□ -0.91
Efnb3O35393 Gm42693-201ENSMUST00000196779 631 ntBASIC9.38□□□□□ -0.91
Efnb3O35393 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC9.38□□□□□ -0.91
Efnb3O35393 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC9.38□□□□□ -0.91
Efnb3O35393 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Efnb3O35393 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms