Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Ndufb11O09111 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufb11O09111 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
Ndufb11O09111 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufb11O09111 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Ndufb11O09111 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC9.44□□□□□ -0.9
Ndufb11O09111 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufb11O09111 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Ndufb11O09111 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufb11O09111 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufb11O09111 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufb11O09111 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufb11O09111 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufb11O09111 Gm19178-201ENSMUST00000217524 1819 ntBASIC9.44□□□□□ -0.9
Ndufb11O09111 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufb11O09111 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufb11O09111 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC9.44□□□□□ -0.9
Ndufb11O09111 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC9.44□□□□□ -0.9
Ndufb11O09111 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufb11O09111 Nrbp2-201ENSMUST00000019516 2495 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufb11O09111 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC9.44□□□□□ -0.9
Ndufb11O09111 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Ndufb11O09111 Gm5403-201ENSMUST00000117105 2795 ntBASIC9.44□□□□□ -0.9
Ndufb11O09111 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Ndufb11O09111 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC9.44□□□□□ -0.9
Ndufb11O09111 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
Ndufb11O09111 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufb11O09111 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufb11O09111 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Ndufb11O09111 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufb11O09111 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufb11O09111 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufb11O09111 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufb11O09111 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufb11O09111 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Ndufb11O09111 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufb11O09111 Gm38271-201ENSMUST00000192296 1603 ntBASIC9.43□□□□□ -0.9
Ndufb11O09111 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC9.43□□□□□ -0.9
Ndufb11O09111 Gm19680-201ENSMUST00000095050 1513 ntBASIC9.43□□□□□ -0.9
Ndufb11O09111 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufb11O09111 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufb11O09111 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC9.43□□□□□ -0.9
Ndufb11O09111 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC9.43□□□□□ -0.9
Ndufb11O09111 Gm11524-201ENSMUST00000119349 807 ntBASIC9.43□□□□□ -0.9
Ndufb11O09111 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufb11O09111 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufb11O09111 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufb11O09111 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufb11O09111 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC9.43□□□□□ -0.9
Ndufb11O09111 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC9.43□□□□□ -0.9
Ndufb11O09111 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC9.43□□□□□ -0.9
Ndufb11O09111 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC9.43□□□□□ -0.9
Ndufb11O09111 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufb11O09111 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufb11O09111 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Ndufb11O09111 Zfp141-203ENSMUST00000174407 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufb11O09111 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufb11O09111 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
Ndufb11O09111 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufb11O09111 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC9.43□□□□□ -0.9
Ndufb11O09111 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Ndufb11O09111 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ndufb11O09111 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Ndufb11O09111 Gm11298-201ENSMUST00000120503 1799 ntBASIC9.42□□□□□ -0.9
Ndufb11O09111 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ndufb11O09111 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC9.42□□□□□ -0.9
Ndufb11O09111 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ndufb11O09111 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Ndufb11O09111 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ndufb11O09111 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ndufb11O09111 Gm11735-201ENSMUST00000106377 1581 ntBASIC9.42□□□□□ -0.9
Ndufb11O09111 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ndufb11O09111 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ndufb11O09111 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC9.42□□□□□ -0.9
Ndufb11O09111 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ndufb11O09111 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ndufb11O09111 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ndufb11O09111 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Ndufb11O09111 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ndufb11O09111 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ndufb11O09111 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC9.42□□□□□ -0.9
Ndufb11O09111 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC9.42□□□□□ -0.9
Ndufb11O09111 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ndufb11O09111 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Ndufb11O09111 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC9.42□□□□□ -0.9
Ndufb11O09111 Gm19078-201ENSMUST00000206311 727 ntBASIC9.42□□□□□ -0.9
Ndufb11O09111 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ndufb11O09111 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ndufb11O09111 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ndufb11O09111 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ndufb11O09111 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ndufb11O09111 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ndufb11O09111 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ndufb11O09111 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Ndufb11O09111 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ndufb11O09111 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ndufb11O09111 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ndufb11O09111 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ndufb11O09111 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Ndufb11O09111 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms