Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.95□□□□□ -0.5
Gm28043E0CXC2 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Gm28043E0CXC2 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Gm9022-201ENSMUST00000182482 992 ntBASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Gm2546-201ENSMUST00000182630 991 ntBASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Gm37201-201ENSMUST00000191845 523 ntBASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.94□□□□□ -0.5
Gm28043E0CXC2 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Gm10076-201ENSMUST00000073238 384 ntBASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Gm28043E0CXC2 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Gm4986-201ENSMUST00000119731 549 ntBASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Gm13875-201ENSMUST00000120162 282 ntBASIC11.93□□□□□ -0.5
Gm28043E0CXC2 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Gm23119-201ENSMUST00000158610 140 ntBASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Gm37489-201ENSMUST00000191883 159 ntBASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Gm18935-201ENSMUST00000212692 664 ntBASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Gm39404-201ENSMUST00000216350 313 ntBASIC11.93□□□□□ -0.5
Gm28043E0CXC2 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Gm28043E0CXC2 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms