Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd6A3KFM7 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd6A3KFM7 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd6A3KFM7 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd6A3KFM7 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd6A3KFM7 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd6A3KFM7 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd6A3KFM7 Gm7805-201ENSMUST00000154348 448 ntBASIC9.55□□□□□ -0.88
Chd6A3KFM7 Mir6387-201ENSMUST00000184042 108 ntBASIC9.55□□□□□ -0.88
Chd6A3KFM7 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd6A3KFM7 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd6A3KFM7 Olfr1535-201ENSMUST00000068163 981 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Chd6A3KFM7 Gm10152-201ENSMUST00000193475 1344 ntBASIC9.55□□□□□ -0.88
Chd6A3KFM7 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd6A3KFM7 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd6A3KFM7 Gm5431-201ENSMUST00000109209 1701 ntTSL 5 BASIC9.55□□□□□ -0.88
Chd6A3KFM7 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd6A3KFM7 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Chd6A3KFM7 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Chd6A3KFM7 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC9.55□□□□□ -0.88
Chd6A3KFM7 Hspa12b-202ENSMUST00000100763 628 ntTSL 2 BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Chd6A3KFM7 E030025P04Rik-201ENSMUST00000106710 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Rab38-201ENSMUST00000107256 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Gm9924-202ENSMUST00000192760 2311 ntBASIC9.54□□□□□ -0.88
Chd6A3KFM7 AI506816-201ENSMUST00000197153 474 ntTSL 5 BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Gm5053-201ENSMUST00000208361 1678 ntBASIC9.54□□□□□ -0.88
Chd6A3KFM7 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Cst10-201ENSMUST00000047008 804 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Mir453-201ENSMUST00000104732 82 ntBASIC9.54□□□□□ -0.88
Chd6A3KFM7 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Csta1-202ENSMUST00000161638 422 ntTSL 3 BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Gm8459-201ENSMUST00000162504 760 ntBASIC9.54□□□□□ -0.88
Chd6A3KFM7 Gm17782-201ENSMUST00000174345 880 ntBASIC9.54□□□□□ -0.88
Chd6A3KFM7 Gm3945-201ENSMUST00000196637 683 ntBASIC9.54□□□□□ -0.88
Chd6A3KFM7 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Gm19046-201ENSMUST00000221263 1298 ntBASIC9.54□□□□□ -0.88
Chd6A3KFM7 Fdps-201ENSMUST00000081848 1237 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 AC164702.1-201ENSMUST00000220135 2212 ntBASIC9.54□□□□□ -0.88
Chd6A3KFM7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Gm12389-201ENSMUST00000117696 418 ntBASIC9.54□□□□□ -0.88
Chd6A3KFM7 Gm11295-201ENSMUST00000121379 803 ntBASIC9.54□□□□□ -0.88
Chd6A3KFM7 Gm11993-201ENSMUST00000121861 820 ntBASIC9.54□□□□□ -0.88
Chd6A3KFM7 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC9.54□□□□□ -0.88
Chd6A3KFM7 Slirp-202ENSMUST00000160488 802 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Gm44605-201ENSMUST00000206892 949 ntBASIC9.54□□□□□ -0.88
Chd6A3KFM7 Gm45113-201ENSMUST00000207518 165 ntBASIC9.54□□□□□ -0.88
Chd6A3KFM7 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Gm6478-201ENSMUST00000099450 742 ntBASIC9.54□□□□□ -0.88
Chd6A3KFM7 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Chd6A3KFM7 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Chd6A3KFM7 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms