Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Gm22323-201ENSMUST00000103832 109 ntBASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Gm6963-201ENSMUST00000147879 379 ntBASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Gm37259-201ENSMUST00000193903 849 ntBASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ClcnkaQ9WUB7 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Gm42498-201ENSMUST00000199981 1372 ntBASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11□□□□□ -0.65
ClcnkaQ9WUB7 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClcnkaQ9WUB7 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
ClcnkaQ9WUB7 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ClcnkaQ9WUB7 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClcnkaQ9WUB7 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ClcnkaQ9WUB7 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ClcnkaQ9WUB7 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClcnkaQ9WUB7 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClcnkaQ9WUB7 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ClcnkaQ9WUB7 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClcnkaQ9WUB7 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClcnkaQ9WUB7 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClcnkaQ9WUB7 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.99□□□□□ -0.65
ClcnkaQ9WUB7 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ClcnkaQ9WUB7 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClcnkaQ9WUB7 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.99□□□□□ -0.65
ClcnkaQ9WUB7 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClcnkaQ9WUB7 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClcnkaQ9WUB7 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ClcnkaQ9WUB7 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
ClcnkaQ9WUB7 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
ClcnkaQ9WUB7 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
ClcnkaQ9WUB7 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.99□□□□□ -0.65
ClcnkaQ9WUB7 Gm11989-201ENSMUST00000117240 672 ntBASIC10.99□□□□□ -0.65
ClcnkaQ9WUB7 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ClcnkaQ9WUB7 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ClcnkaQ9WUB7 Gm11362-201ENSMUST00000118838 850 ntBASIC10.99□□□□□ -0.65
ClcnkaQ9WUB7 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
ClcnkaQ9WUB7 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.99□□□□□ -0.65
ClcnkaQ9WUB7 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms