Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.34□□□□□ -0.27
Cacna1fQ9JIS7 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1fQ9JIS7 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1fQ9JIS7 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC13.34□□□□□ -0.27
Cacna1fQ9JIS7 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1fQ9JIS7 Gm14274-201ENSMUST00000117182 615 ntBASIC13.34□□□□□ -0.27
Cacna1fQ9JIS7 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC13.34□□□□□ -0.27
Cacna1fQ9JIS7 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1fQ9JIS7 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1fQ9JIS7 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1fQ9JIS7 Gm18986-201ENSMUST00000216029 1986 ntBASIC13.34□□□□□ -0.27
Cacna1fQ9JIS7 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1fQ9JIS7 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1fQ9JIS7 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1fQ9JIS7 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1fQ9JIS7 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1fQ9JIS7 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.34□□□□□ -0.27
Cacna1fQ9JIS7 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cacna1fQ9JIS7 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1fQ9JIS7 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1fQ9JIS7 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1fQ9JIS7 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1fQ9JIS7 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1fQ9JIS7 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1fQ9JIS7 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC13.33□□□□□ -0.28
Cacna1fQ9JIS7 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1fQ9JIS7 Gm17889-201ENSMUST00000198410 598 ntBASIC13.33□□□□□ -0.28
Cacna1fQ9JIS7 n-R5s185-201ENSMUST00000083953 119 ntBASIC13.33□□□□□ -0.28
Cacna1fQ9JIS7 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cacna1fQ9JIS7 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1fQ9JIS7 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cacna1fQ9JIS7 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cacna1fQ9JIS7 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cacna1fQ9JIS7 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1fQ9JIS7 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1fQ9JIS7 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cacna1fQ9JIS7 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1fQ9JIS7 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1fQ9JIS7 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cacna1fQ9JIS7 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.33□□□□□ -0.28
Cacna1fQ9JIS7 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1fQ9JIS7 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1fQ9JIS7 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Cacna1fQ9JIS7 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1fQ9JIS7 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1fQ9JIS7 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cacna1fQ9JIS7 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Cacna1fQ9JIS7 Gm5308-201ENSMUST00000196752 1354 ntBASIC13.33□□□□□ -0.28
Cacna1fQ9JIS7 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 B2m-201ENSMUST00000102476 860 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Gm12663-201ENSMUST00000118481 958 ntBASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 AC130477.1-201ENSMUST00000226982 420 ntBASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Gm5468-202ENSMUST00000227851 682 ntBASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Gm25201-201ENSMUST00000083093 170 ntBASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Gm44056-201ENSMUST00000204623 1427 ntBASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Gm11500-201ENSMUST00000118237 601 ntBASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Gm15197-201ENSMUST00000120526 478 ntBASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Gm16030-201ENSMUST00000159098 603 ntBASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Gm44647-201ENSMUST00000207402 428 ntBASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Gm19046-201ENSMUST00000221263 1298 ntBASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cacna1fQ9JIS7 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms