Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Ighv1-62-201ENSMUST00000193406 350 ntBASIC12.37□□□□□ -0.43
Cpne8Q9DC53 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.37□□□□□ -0.43
Cpne8Q9DC53 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.37□□□□□ -0.43
Cpne8Q9DC53 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.37□□□□□ -0.43
Cpne8Q9DC53 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.37□□□□□ -0.43
Cpne8Q9DC53 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Gm15004-201ENSMUST00000119192 630 ntBASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Gm17376-201ENSMUST00000166016 84 ntBASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Gm7584-201ENSMUST00000175829 940 ntBASIC12.36□□□□□ -0.43
Cpne8Q9DC53 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Gm38314-201ENSMUST00000195709 625 ntBASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Lect2-202ENSMUST00000225183 823 ntBASIC12.36□□□□□ -0.43
Cpne8Q9DC53 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cpne8Q9DC53 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne8Q9DC53 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne8Q9DC53 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne8Q9DC53 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne8Q9DC53 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne8Q9DC53 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne8Q9DC53 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cpne8Q9DC53 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Cpne8Q9DC53 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne8Q9DC53 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cpne8Q9DC53 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.35□□□□□ -0.43
Cpne8Q9DC53 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cpne8Q9DC53 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms