Protein–RNA interactions for Protein: Q9D0C1

Rnf115, E3 ubiquitin-protein ligase RNF115, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf115Q9D0C1 Gm5733-201ENSMUST00000190232 939 ntBASIC10.26□□□□□ -0.77
Rnf115Q9D0C1 Gm2965-201ENSMUST00000198365 343 ntBASIC10.26□□□□□ -0.77
Rnf115Q9D0C1 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf115Q9D0C1 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.26□□□□□ -0.77
Rnf115Q9D0C1 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf115Q9D0C1 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.26□□□□□ -0.77
Rnf115Q9D0C1 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf115Q9D0C1 AC122408.1-201ENSMUST00000218949 218 ntBASIC10.26□□□□□ -0.77
Rnf115Q9D0C1 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC10.26□□□□□ -0.77
Rnf115Q9D0C1 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf115Q9D0C1 Gm5455-201ENSMUST00000058710 715 ntBASIC10.26□□□□□ -0.77
Rnf115Q9D0C1 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Rnf115Q9D0C1 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Rnf115Q9D0C1 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC10.26□□□□□ -0.77
Rnf115Q9D0C1 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Rnf115Q9D0C1 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf115Q9D0C1 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.26□□□□□ -0.77
Rnf115Q9D0C1 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.26□□□□□ -0.77
Rnf115Q9D0C1 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf115Q9D0C1 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
Rnf115Q9D0C1 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf115Q9D0C1 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf115Q9D0C1 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf115Q9D0C1 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Rnf115Q9D0C1 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Gm8100-201ENSMUST00000182906 988 ntBASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Gm7593-201ENSMUST00000187246 644 ntBASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
Rnf115Q9D0C1 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
Rnf115Q9D0C1 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf115Q9D0C1 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf115Q9D0C1 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf115Q9D0C1 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Rnf115Q9D0C1 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf115Q9D0C1 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf115Q9D0C1 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.24□□□□□ -0.77
Rnf115Q9D0C1 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Rnf115Q9D0C1 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf115Q9D0C1 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf115Q9D0C1 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.24□□□□□ -0.77
Rnf115Q9D0C1 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Rnf115Q9D0C1 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.24□□□□□ -0.77
Rnf115Q9D0C1 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms