Protein–RNA interactions for Protein: Q9CXE6

Xrcc3, DNA repair protein XRCC3, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc3Q9CXE6 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Gm13050-201ENSMUST00000122149 1345 ntBASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Gm15920-201ENSMUST00000118998 402 ntBASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Gm12201-201ENSMUST00000120657 1234 ntBASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 AC169511.2-201ENSMUST00000226674 2063 ntBASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Xrcc3Q9CXE6 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Gm12091-201ENSMUST00000146791 830 ntBASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Gm7029-201ENSMUST00000173226 450 ntBASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Gm4271-201ENSMUST00000174444 973 ntBASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Gm5904-201ENSMUST00000210286 865 ntBASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Gm29705-201ENSMUST00000212598 474 ntBASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Gm45925-201ENSMUST00000218882 744 ntBASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Gm37969-201ENSMUST00000195777 3409 ntBASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Gm43773-201ENSMUST00000198548 2162 ntBASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Gm38140-201ENSMUST00000193617 2755 ntBASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Xrcc3Q9CXE6 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.87
Xrcc3Q9CXE6 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms