Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gm6114-201ENSMUST00000182472 968 ntBASIC13.6□□□□□ -0.23
Trex1Q91XB0 Gm17877-201ENSMUST00000192578 814 ntBASIC13.6□□□□□ -0.23
Trex1Q91XB0 Gm37981-201ENSMUST00000194280 535 ntBASIC13.6□□□□□ -0.23
Trex1Q91XB0 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trex1Q91XB0 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trex1Q91XB0 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.6□□□□□ -0.23
Trex1Q91XB0 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.6□□□□□ -0.23
Trex1Q91XB0 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trex1Q91XB0 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trex1Q91XB0 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trex1Q91XB0 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trex1Q91XB0 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trex1Q91XB0 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trex1Q91XB0 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trex1Q91XB0 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Trex1Q91XB0 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trex1Q91XB0 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trex1Q91XB0 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trex1Q91XB0 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trex1Q91XB0 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trex1Q91XB0 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trex1Q91XB0 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trex1Q91XB0 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trex1Q91XB0 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trex1Q91XB0 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Trex1Q91XB0 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trex1Q91XB0 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trex1Q91XB0 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trex1Q91XB0 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trex1Q91XB0 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Trex1Q91XB0 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trex1Q91XB0 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trex1Q91XB0 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trex1Q91XB0 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trex1Q91XB0 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trex1Q91XB0 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trex1Q91XB0 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trex1Q91XB0 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trex1Q91XB0 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC13.59□□□□□ -0.23
Trex1Q91XB0 Gm4879-201ENSMUST00000122190 1272 ntBASIC13.59□□□□□ -0.23
Trex1Q91XB0 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trex1Q91XB0 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trex1Q91XB0 Gm10807-201ENSMUST00000177134 795 ntBASIC13.59□□□□□ -0.23
Trex1Q91XB0 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trex1Q91XB0 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.59□□□□□ -0.23
Trex1Q91XB0 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.59□□□□□ -0.23
Trex1Q91XB0 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trex1Q91XB0 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC13.59□□□□□ -0.23
Trex1Q91XB0 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trex1Q91XB0 AC166341.2-201ENSMUST00000220571 120 ntBASIC13.59□□□□□ -0.23
Trex1Q91XB0 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trex1Q91XB0 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trex1Q91XB0 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trex1Q91XB0 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trex1Q91XB0 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trex1Q91XB0 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Trex1Q91XB0 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trex1Q91XB0 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.59□□□□□ -0.23
Trex1Q91XB0 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trex1Q91XB0 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trex1Q91XB0 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trex1Q91XB0 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trex1Q91XB0 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trex1Q91XB0 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trex1Q91XB0 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trex1Q91XB0 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trex1Q91XB0 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trex1Q91XB0 Gm26013-201ENSMUST00000104404 119 ntBASIC13.58□□□□□ -0.24
Trex1Q91XB0 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Trex1Q91XB0 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trex1Q91XB0 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trex1Q91XB0 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.58□□□□□ -0.24
Trex1Q91XB0 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC13.58□□□□□ -0.24
Trex1Q91XB0 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trex1Q91XB0 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trex1Q91XB0 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trex1Q91XB0 Gm29155-201ENSMUST00000185910 269 ntBASIC13.58□□□□□ -0.24
Trex1Q91XB0 Gm37028-201ENSMUST00000194276 107 ntBASIC13.58□□□□□ -0.24
Trex1Q91XB0 Gm5982-201ENSMUST00000196234 512 ntBASIC13.58□□□□□ -0.24
Trex1Q91XB0 Gm42518-201ENSMUST00000196277 938 ntBASIC13.58□□□□□ -0.24
Trex1Q91XB0 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trex1Q91XB0 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trex1Q91XB0 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trex1Q91XB0 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trex1Q91XB0 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trex1Q91XB0 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trex1Q91XB0 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trex1Q91XB0 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trex1Q91XB0 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trex1Q91XB0 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trex1Q91XB0 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trex1Q91XB0 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trex1Q91XB0 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trex1Q91XB0 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trex1Q91XB0 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trex1Q91XB0 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trex1Q91XB0 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trex1Q91XB0 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trex1Q91XB0 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trex1Q91XB0 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms