Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.64□□□□□ -0.39
Ccdc87Q8CDL9 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc87Q8CDL9 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc87Q8CDL9 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc87Q8CDL9 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc87Q8CDL9 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccdc87Q8CDL9 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccdc87Q8CDL9 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.64□□□□□ -0.39
Ccdc87Q8CDL9 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc87Q8CDL9 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc87Q8CDL9 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccdc87Q8CDL9 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ccdc87Q8CDL9 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc87Q8CDL9 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc87Q8CDL9 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Gm24934-201ENSMUST00000103764 111 ntBASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Gm38341-201ENSMUST00000195357 515 ntBASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Gm7783-201ENSMUST00000204795 781 ntBASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc87Q8CDL9 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Gm43758-201ENSMUST00000199500 367 ntBASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Gm8420-201ENSMUST00000097103 598 ntBASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Ccdc87Q8CDL9 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ccdc87Q8CDL9 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms