Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pabpn1Q8CCS6 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Pabpn1Q8CCS6 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Pabpn1Q8CCS6 CT010480.4-201ENSMUST00000224654 2283 ntBASIC18.09■□□□□ 0.49
Pabpn1Q8CCS6 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pabpn1Q8CCS6 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pabpn1Q8CCS6 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pabpn1Q8CCS6 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pabpn1Q8CCS6 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.49
Pabpn1Q8CCS6 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Pabpn1Q8CCS6 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC18.08■□□□□ 0.49
Pabpn1Q8CCS6 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pabpn1Q8CCS6 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pabpn1Q8CCS6 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pabpn1Q8CCS6 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pabpn1Q8CCS6 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pabpn1Q8CCS6 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Pabpn1Q8CCS6 Lyrm1-202ENSMUST00000106516 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pabpn1Q8CCS6 Gm12947-201ENSMUST00000116114 420 ntBASIC18.08■□□□□ 0.48
Pabpn1Q8CCS6 Gm12774-201ENSMUST00000117881 416 ntBASIC18.08■□□□□ 0.48
Pabpn1Q8CCS6 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pabpn1Q8CCS6 Zfp419-201ENSMUST00000173446 916 ntBASIC18.08■□□□□ 0.48
Pabpn1Q8CCS6 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC18.08■□□□□ 0.48
Pabpn1Q8CCS6 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC18.08■□□□□ 0.48
Pabpn1Q8CCS6 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pabpn1Q8CCS6 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC18.08■□□□□ 0.48
Pabpn1Q8CCS6 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC18.08■□□□□ 0.48
Pabpn1Q8CCS6 CT010505.2-201ENSMUST00000227918 998 ntBASIC18.08■□□□□ 0.48
Pabpn1Q8CCS6 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Pabpn1Q8CCS6 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC18.08■□□□□ 0.48
Pabpn1Q8CCS6 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pabpn1Q8CCS6 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pabpn1Q8CCS6 AC137842.1-201ENSMUST00000227896 2064 ntBASIC18.08■□□□□ 0.48
Pabpn1Q8CCS6 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pabpn1Q8CCS6 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pabpn1Q8CCS6 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Pabpn1Q8CCS6 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pabpn1Q8CCS6 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pabpn1Q8CCS6 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pabpn1Q8CCS6 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pabpn1Q8CCS6 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pabpn1Q8CCS6 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pabpn1Q8CCS6 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pabpn1Q8CCS6 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pabpn1Q8CCS6 Gm42498-201ENSMUST00000199981 1372 ntBASIC18.07■□□□□ 0.48
Pabpn1Q8CCS6 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
Pabpn1Q8CCS6 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Pabpn1Q8CCS6 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pabpn1Q8CCS6 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC18.07■□□□□ 0.48
Pabpn1Q8CCS6 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC18.07■□□□□ 0.48
Pabpn1Q8CCS6 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pabpn1Q8CCS6 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pabpn1Q8CCS6 Mir3100-201ENSMUST00000174918 65 ntBASIC18.07■□□□□ 0.48
Pabpn1Q8CCS6 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC18.07■□□□□ 0.48
Pabpn1Q8CCS6 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC18.07■□□□□ 0.48
Pabpn1Q8CCS6 Gm6352-201ENSMUST00000203583 1134 ntBASIC18.07■□□□□ 0.48
Pabpn1Q8CCS6 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pabpn1Q8CCS6 AC163646.3-201ENSMUST00000228879 772 ntBASIC18.07■□□□□ 0.48
Pabpn1Q8CCS6 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pabpn1Q8CCS6 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pabpn1Q8CCS6 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pabpn1Q8CCS6 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC18.07■□□□□ 0.48
Pabpn1Q8CCS6 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pabpn1Q8CCS6 Gm38246-201ENSMUST00000194318 1511 ntBASIC18.07■□□□□ 0.48
Pabpn1Q8CCS6 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pabpn1Q8CCS6 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC18.07■□□□□ 0.48
Pabpn1Q8CCS6 Gm37582-201ENSMUST00000192953 1409 ntBASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Ksr1-207ENSMUST00000226282 5260 ntBASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Gm9133-201ENSMUST00000118289 540 ntBASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Gm12435-201ENSMUST00000118949 1016 ntBASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Gm14639-201ENSMUST00000120850 866 ntBASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Gm3828-201ENSMUST00000121817 257 ntBASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Gm5526-201ENSMUST00000153604 423 ntBASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Gm18555-201ENSMUST00000197935 584 ntBASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Gm2566-201ENSMUST00000201267 431 ntBASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Gm44420-201ENSMUST00000203669 490 ntBASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Gm8873-201ENSMUST00000217847 1439 ntBASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pabpn1Q8CCS6 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms