Protein–RNA interactions for Protein: Q8C9F4

Gm9949, Predicted gene 9949, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9949Q8C9F4 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 AC171277.1-201ENSMUST00000216902 1441 ntBASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Gm9949Q8C9F4 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Mir6420-201ENSMUST00000185032 102 ntBASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Gm8913-201ENSMUST00000209491 641 ntBASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 AC121960.1-201ENSMUST00000227982 564 ntBASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Gm9949Q8C9F4 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm9949Q8C9F4 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Gm9949Q8C9F4 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm9949Q8C9F4 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm9949Q8C9F4 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm9949Q8C9F4 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm9949Q8C9F4 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Gm9949Q8C9F4 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Gm9949Q8C9F4 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm9949Q8C9F4 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Gm9949Q8C9F4 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Gm9949Q8C9F4 Gm8146-201ENSMUST00000192106 1847 ntBASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms