Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm37448-201ENSMUST00000192795 697 ntBASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.11□□□□□ -0.31
Trim9Q8C7M3 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Gm4157-201ENSMUST00000211647 679 ntBASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trim9Q8C7M3 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim9Q8C7M3 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim9Q8C7M3 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trim9Q8C7M3 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim9Q8C7M3 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim9Q8C7M3 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim9Q8C7M3 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim9Q8C7M3 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim9Q8C7M3 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim9Q8C7M3 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim9Q8C7M3 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim9Q8C7M3 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trim9Q8C7M3 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim9Q8C7M3 Gm14130-201ENSMUST00000118417 987 ntBASIC13.1□□□□□ -0.31
Trim9Q8C7M3 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim9Q8C7M3 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.1□□□□□ -0.31
Trim9Q8C7M3 Gm7003-201ENSMUST00000195089 312 ntBASIC13.1□□□□□ -0.31
Trim9Q8C7M3 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.1□□□□□ -0.31
Trim9Q8C7M3 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Trim9Q8C7M3 Gm45433-201ENSMUST00000209386 247 ntBASIC13.1□□□□□ -0.31
Trim9Q8C7M3 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Trim9Q8C7M3 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim9Q8C7M3 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim9Q8C7M3 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim9Q8C7M3 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trim9Q8C7M3 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim9Q8C7M3 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim9Q8C7M3 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim9Q8C7M3 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim9Q8C7M3 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim9Q8C7M3 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Trim9Q8C7M3 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC13.1□□□□□ -0.31
Trim9Q8C7M3 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trim9Q8C7M3 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Gm24749-201ENSMUST00000157838 343 ntBASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim9Q8C7M3 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim9Q8C7M3 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trim9Q8C7M3 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Trim9Q8C7M3 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC13.08□□□□□ -0.31
Trim9Q8C7M3 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Trim9Q8C7M3 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms