Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubp1Q811S7 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.82□□□□□ -0.52
Ubp1Q811S7 AC107452.3-201ENSMUST00000228807 1308 ntBASIC11.82□□□□□ -0.52
Ubp1Q811S7 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.82□□□□□ -0.52
Ubp1Q811S7 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubp1Q811S7 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ubp1Q811S7 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.81□□□□□ -0.52
Ubp1Q811S7 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubp1Q811S7 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.81□□□□□ -0.52
Ubp1Q811S7 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.81□□□□□ -0.52
Ubp1Q811S7 Gm2383-201ENSMUST00000181461 807 ntBASIC11.81□□□□□ -0.52
Ubp1Q811S7 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.81□□□□□ -0.52
Ubp1Q811S7 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC11.81□□□□□ -0.52
Ubp1Q811S7 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.81□□□□□ -0.52
Ubp1Q811S7 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.81□□□□□ -0.52
Ubp1Q811S7 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.81□□□□□ -0.52
Ubp1Q811S7 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubp1Q811S7 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.81□□□□□ -0.52
Ubp1Q811S7 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubp1Q811S7 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubp1Q811S7 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.8□□□□□ -0.52
Ubp1Q811S7 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Gm5708-201ENSMUST00000196289 886 ntBASIC11.8□□□□□ -0.52
Ubp1Q811S7 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.8□□□□□ -0.52
Ubp1Q811S7 Gm45433-201ENSMUST00000209386 247 ntBASIC11.8□□□□□ -0.52
Ubp1Q811S7 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.8□□□□□ -0.52
Ubp1Q811S7 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.8□□□□□ -0.52
Ubp1Q811S7 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.8□□□□□ -0.52
Ubp1Q811S7 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Gm5455-201ENSMUST00000058710 715 ntBASIC11.8□□□□□ -0.52
Ubp1Q811S7 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Mir433-201ENSMUST00000093564 124 ntBASIC11.8□□□□□ -0.52
Ubp1Q811S7 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubp1Q811S7 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms