Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.42□□□□□ -0.42
Cspg5Q71M36 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cspg5Q71M36 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cspg5Q71M36 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.42□□□□□ -0.42
Cspg5Q71M36 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Cspg5Q71M36 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cspg5Q71M36 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cspg5Q71M36 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cspg5Q71M36 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.42□□□□□ -0.42
Cspg5Q71M36 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cspg5Q71M36 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.41□□□□□ -0.42
Cspg5Q71M36 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Cspg5Q71M36 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cspg5Q71M36 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cspg5Q71M36 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cspg5Q71M36 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cspg5Q71M36 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cspg5Q71M36 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.41□□□□□ -0.42
Cspg5Q71M36 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.41□□□□□ -0.42
Cspg5Q71M36 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.41□□□□□ -0.42
Cspg5Q71M36 Gm8194-201ENSMUST00000159783 859 ntBASIC12.41□□□□□ -0.42
Cspg5Q71M36 Gm27530-201ENSMUST00000184096 98 ntBASIC12.41□□□□□ -0.42
Cspg5Q71M36 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.41□□□□□ -0.42
Cspg5Q71M36 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.41□□□□□ -0.42
Cspg5Q71M36 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cspg5Q71M36 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cspg5Q71M36 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cspg5Q71M36 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cspg5Q71M36 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cspg5Q71M36 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cspg5Q71M36 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cspg5Q71M36 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cspg5Q71M36 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cspg5Q71M36 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cspg5Q71M36 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.41□□□□□ -0.42
Cspg5Q71M36 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cspg5Q71M36 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Cspg5Q71M36 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Gm22133-201ENSMUST00000102082 109 ntBASIC12.4□□□□□ -0.42
Cspg5Q71M36 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Gm4993-201ENSMUST00000118719 1174 ntBASIC12.4□□□□□ -0.42
Cspg5Q71M36 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Gm17391-201ENSMUST00000171036 126 ntBASIC12.4□□□□□ -0.42
Cspg5Q71M36 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.4□□□□□ -0.42
Cspg5Q71M36 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Gm43916-201ENSMUST00000205062 967 ntBASIC12.4□□□□□ -0.42
Cspg5Q71M36 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC12.4□□□□□ -0.42
Cspg5Q71M36 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.4□□□□□ -0.42
Cspg5Q71M36 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cspg5Q71M36 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cspg5Q71M36 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cspg5Q71M36 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.4□□□□□ -0.43
Cspg5Q71M36 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.43
Cspg5Q71M36 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cspg5Q71M36 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms