Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm7287-201ENSMUST00000205267 602 ntBASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Mir339-201ENSMUST00000083659 96 ntBASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.28□□□□□ -0.6
Rnf220Q6PDX6 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf220Q6PDX6 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf220Q6PDX6 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf220Q6PDX6 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.27□□□□□ -0.6
Rnf220Q6PDX6 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf220Q6PDX6 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf220Q6PDX6 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.27□□□□□ -0.6
Rnf220Q6PDX6 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf220Q6PDX6 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.27□□□□□ -0.6
Rnf220Q6PDX6 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf220Q6PDX6 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Rnf220Q6PDX6 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rnf220Q6PDX6 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Rnf220Q6PDX6 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Gm13123-201ENSMUST00000122173 492 ntBASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Gm20614-201ENSMUST00000177106 632 ntBASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Proscos-202ENSMUST00000178990 666 ntBASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Gm37922-201ENSMUST00000195596 455 ntBASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rnf220Q6PDX6 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Gm14704-201ENSMUST00000120300 874 ntBASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Gm11637-201ENSMUST00000120601 592 ntBASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Gm8099-201ENSMUST00000200510 742 ntBASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rnf220Q6PDX6 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms