Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Scn9aQ62205 Gm2594-201ENSMUST00000214774 742 ntBASIC13.76□□□□□ -0.21
Scn9aQ62205 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn9aQ62205 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Scn9aQ62205 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Scn9aQ62205 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn9aQ62205 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn9aQ62205 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.76□□□□□ -0.21
Scn9aQ62205 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Scn9aQ62205 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.76□□□□□ -0.21
Scn9aQ62205 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scn9aQ62205 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn9aQ62205 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn9aQ62205 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn9aQ62205 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn9aQ62205 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scn9aQ62205 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Scn9aQ62205 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Scn9aQ62205 Gm14005-210ENSMUST00000225087 1413 ntBASIC13.76□□□□□ -0.21
Scn9aQ62205 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scn9aQ62205 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn9aQ62205 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn9aQ62205 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Scn9aQ62205 Gm25148-201ENSMUST00000104611 123 ntBASIC13.76□□□□□ -0.21
Scn9aQ62205 Gm7985-201ENSMUST00000183329 981 ntBASIC13.76□□□□□ -0.21
Scn9aQ62205 Mir7035-201ENSMUST00000184713 82 ntBASIC13.76□□□□□ -0.21
Scn9aQ62205 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC13.76□□□□□ -0.21
Scn9aQ62205 Gm43506-201ENSMUST00000200675 753 ntBASIC13.76□□□□□ -0.21
Scn9aQ62205 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
Scn9aQ62205 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn9aQ62205 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn9aQ62205 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scn9aQ62205 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Scn9aQ62205 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn9aQ62205 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Scn9aQ62205 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Scn9aQ62205 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn9aQ62205 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn9aQ62205 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn9aQ62205 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn9aQ62205 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Scn9aQ62205 Gm13422-201ENSMUST00000118834 504 ntBASIC13.75□□□□□ -0.21
Scn9aQ62205 Gm16219-201ENSMUST00000120096 274 ntBASIC13.75□□□□□ -0.21
Scn9aQ62205 Mir7051-201ENSMUST00000184167 73 ntBASIC13.75□□□□□ -0.21
Scn9aQ62205 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC13.75□□□□□ -0.21
Scn9aQ62205 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn9aQ62205 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn9aQ62205 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn9aQ62205 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn9aQ62205 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn9aQ62205 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn9aQ62205 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn9aQ62205 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn9aQ62205 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Scn9aQ62205 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Scn9aQ62205 Mir453-201ENSMUST00000104732 82 ntBASIC13.74□□□□□ -0.21
Scn9aQ62205 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Scn9aQ62205 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Scn9aQ62205 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn9aQ62205 Gm14497-201ENSMUST00000119537 580 ntBASIC13.74□□□□□ -0.21
Scn9aQ62205 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC13.74□□□□□ -0.21
Scn9aQ62205 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC13.74□□□□□ -0.21
Scn9aQ62205 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC13.74□□□□□ -0.21
Scn9aQ62205 Gm37365-201ENSMUST00000193109 409 ntBASIC13.74□□□□□ -0.21
Scn9aQ62205 Gm38314-201ENSMUST00000195709 625 ntBASIC13.74□□□□□ -0.21
Scn9aQ62205 Gm30946-201ENSMUST00000198288 724 ntBASIC13.74□□□□□ -0.21
Scn9aQ62205 Gm44323-201ENSMUST00000198689 129 ntBASIC13.74□□□□□ -0.21
Scn9aQ62205 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Scn9aQ62205 AC154589.2-201ENSMUST00000228847 251 ntBASIC13.74□□□□□ -0.21
Scn9aQ62205 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn9aQ62205 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scn9aQ62205 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn9aQ62205 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scn9aQ62205 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
Scn9aQ62205 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Scn9aQ62205 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn9aQ62205 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scn9aQ62205 Gm44106-201ENSMUST00000203153 1599 ntBASIC13.74□□□□□ -0.21
Scn9aQ62205 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn9aQ62205 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn9aQ62205 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn9aQ62205 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn9aQ62205 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scn9aQ62205 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn9aQ62205 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn9aQ62205 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scn9aQ62205 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn9aQ62205 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scn9aQ62205 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scn9aQ62205 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scn9aQ62205 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC13.74□□□□□ -0.21
Scn9aQ62205 Gm9369-201ENSMUST00000196009 733 ntBASIC13.74□□□□□ -0.21
Scn9aQ62205 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scn9aQ62205 Gm7192-201ENSMUST00000210793 1137 ntBASIC13.74□□□□□ -0.21
Scn9aQ62205 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scn9aQ62205 Gm9791-201ENSMUST00000060997 447 ntBASIC13.74□□□□□ -0.21
Scn9aQ62205 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Scn9aQ62205 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn9aQ62205 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Scn9aQ62205 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms