Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tnfaip3Q60769 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Cog3-203ENSMUST00000227473 4197 ntBASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Gm23596-201ENSMUST00000104304 132 ntBASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Gm18893-201ENSMUST00000198416 943 ntBASIC11.25□□□□□ -0.61
Tnfaip3Q60769 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Gm807-202ENSMUST00000224929 408 ntBASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Gm5705-201ENSMUST00000066241 711 ntBASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Gm9333-201ENSMUST00000205452 1323 ntBASIC11.25□□□□□ -0.61
Tnfaip3Q60769 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tnfaip3Q60769 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Gm12196-201ENSMUST00000120954 262 ntBASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Gm11660-201ENSMUST00000120955 412 ntBASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tnfaip3Q60769 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfaip3Q60769 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tnfaip3Q60769 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.23□□□□□ -0.61
Tnfaip3Q60769 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Tnfaip3Q60769 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Tnfaip3Q60769 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 99.9 ms