Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Gm16372-201ENSMUST00000073088 450 ntBASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Gm10463-202ENSMUST00000195772 2889 ntBASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Trav3-3Q5R1C3 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Mir7023-201ENSMUST00000185093 64 ntBASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Gm29667-201ENSMUST00000190817 490 ntBASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Gm31326-201ENSMUST00000191856 1048 ntBASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 AC139382.1-201ENSMUST00000221402 498 ntBASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Gm10417-201ENSMUST00000194341 3522 ntBASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC8.93□□□□□ -0.98
Trav3-3Q5R1C3 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 AC115891.3-201ENSMUST00000219161 2472 ntBASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 129.4 ms