Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Gm28686-201ENSMUST00000187404 609 ntBASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Nlrc4Q3UP24 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Gm18734-201ENSMUST00000172937 808 ntBASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Mir7070-201ENSMUST00000183657 86 ntBASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Nlrc4Q3UP24 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nlrc4Q3UP24 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nlrc4Q3UP24 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nlrc4Q3UP24 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nlrc4Q3UP24 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nlrc4Q3UP24 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nlrc4Q3UP24 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nlrc4Q3UP24 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nlrc4Q3UP24 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nlrc4Q3UP24 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nlrc4Q3UP24 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.53□□□□□ -0.4
Nlrc4Q3UP24 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nlrc4Q3UP24 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Nlrc4Q3UP24 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.53□□□□□ -0.4
Nlrc4Q3UP24 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nlrc4Q3UP24 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nlrc4Q3UP24 Gm8566-201ENSMUST00000120174 465 ntBASIC12.53□□□□□ -0.4
Nlrc4Q3UP24 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.53□□□□□ -0.4
Nlrc4Q3UP24 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms